Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2759

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,190,040	+		Rru_A2757	0.77	-0.0
3,190,040	+		Rru_A2757	0.77	-0.4
3,190,041	-		Rru_A2757	0.77	+0.0
3,190,081	+		Rru_A2757	0.79	+0.7
3,190,081	+		Rru_A2757	0.79	-0.8
3,190,170	+		Rru_A2757	0.84	+0.6
3,190,170	+		Rru_A2757	0.84	-0.0
3,190,171	-		Rru_A2757	0.85	-0.0
3,190,366	-				-0.0
3,190,366	-				-0.0
3,190,401	+				+1.1
3,190,401	+				-0.0
3,190,401	+				+0.8
3,190,401	+				-0.0
3,190,402	-				+1.2
3,190,402	-				-1.3
3,190,402	-				+0.5
3,190,402	-				-0.0
3,190,402	-				+1.1
3,190,402	-				+0.2
3,190,402	-				+0.0
3,190,403	+				+0.3
3,190,403	+				-0.0
3,190,403	+				+0.6
3,190,403	+				+0.0
3,190,403	+				-0.0
3,190,404	-				-0.0
3,190,404	-				+0.6
3,190,404	-				+0.3
3,190,404	-				-0.0
3,190,404	-				+0.6
3,190,443	+				-0.0
3,190,444	-				-0.0
3,190,464	-				+0.4
3,190,464	-				-1.0
3,190,536	-				-0.5
3,190,536	-				+0.3
3,190,630	+		Rru_A2758	0.33	+0.6
3,190,630	+		Rru_A2758	0.33	+1.0
3,190,875	+				+1.1
3,190,876	-				-0.0
3,190,876	-				-0.0
3,190,876	-				-0.6
3,190,876	-				-0.5
3,190,876	-				+0.1
3,190,876	-				-0.0
3,190,916	+				-0.1
3,190,916	+				+0.2
3,190,916	+				-1.4
3,190,917	-				+1.4
3,190,932	+				+0.1
3,190,932	+				-1.0
3,190,933	-				-0.0
3,191,203	-		Rru_A2759	0.16	+1.3
3,191,203	-		Rru_A2759	0.16	-0.0
3,191,261	-		Rru_A2759	0.20	-0.0
3,191,346	+		Rru_A2759	0.25	+0.6
3,191,347	-		Rru_A2759	0.25	+0.6
3,191,347	-		Rru_A2759	0.25	+1.1
3,191,727	+		Rru_A2759	0.48	-0.7
3,191,727	+		Rru_A2759	0.48	-0.0
3,191,727	+		Rru_A2759	0.48	-0.0
3,191,727	+		Rru_A2759	0.48	+0.2
3,191,727	+		Rru_A2759	0.48	-0.1
3,191,727	+		Rru_A2759	0.48	+0.2
3,191,728	-		Rru_A2759	0.48	+0.3
3,191,728	-		Rru_A2759	0.48	-0.0
3,191,728	-		Rru_A2759	0.48	-0.0
3,191,728	-		Rru_A2759	0.48	-0.0
3,191,778	+		Rru_A2759	0.51	-0.4
3,191,778	+		Rru_A2759	0.51	+1.1
3,191,778	+		Rru_A2759	0.51	-0.0
3,191,779	-		Rru_A2759	0.51	-0.0
3,191,779	-		Rru_A2759	0.51	-1.0
3,191,782	+		Rru_A2759	0.52	+0.1
3,191,782	+		Rru_A2759	0.52	-0.4
3,191,783	-		Rru_A2759	0.52	-0.2
3,191,917	+		Rru_A2759	0.60	-0.0
3,192,074	-		Rru_A2759	0.69	-0.0
3,192,090	+		Rru_A2759	0.70	-1.0
3,192,090	+		Rru_A2759	0.70	+0.4
3,192,091	-		Rru_A2759	0.70	-0.0
3,192,114	+		Rru_A2759	0.72	+0.4
3,192,114	+		Rru_A2759	0.72	-0.0
3,192,288	+		Rru_A2759	0.82	-0.0
3,192,289	-		Rru_A2759	0.82	+0.3
3,192,444	+				-0.0
3,192,444	+				-0.0
3,192,445	-				-1.0
3,192,450	+				-0.0
3,192,450	+				+0.5
3,192,450	+				-1.0
3,192,450	+				+0.4
3,192,450	+				+0.5
3,192,451	-				+0.0
3,192,451	-				+0.2
3,192,451	-				-0.0
3,192,570	+				+1.2
3,192,571	-				-2.4
3,192,571	-				+0.9
3,192,576	+				+1.5
3,192,576	+				+1.1
3,192,576	+				-0.0
3,192,576	+				-0.0
3,192,576	+				-0.0
3,192,576	+				-0.0
3,192,576	+				+2.3
3,192,576	+				+1.0
3,192,576	+				+1.8
3,192,576	+				+1.5
3,192,576	+				+1.3
3,192,576	+				+0.9
3,192,577	-				+0.8
3,192,577	-				-0.0
3,192,577	-				-0.6
3,192,577	-				-0.0
3,192,577	-				-0.0
3,192,577	-				+0.7
3,192,577	-				-0.0
3,192,577	-				+0.4
3,192,636	+				+1.5
3,192,914	+				-0.0
3,192,914	+				+0.6
3,192,914	+				-0.2
3,192,938	+		Rru_A2760	0.11	+0.4
3,193,185	+				-0.0
3,193,568	-		Rru_A2761	0.19	-0.1