Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2743

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,175,057	+		Rru_A2742	0.50	-1.0
3,175,057	+		Rru_A2742	0.50	+0.9
3,175,057	+		Rru_A2742	0.50	+1.8
3,175,057	+		Rru_A2742	0.50	-0.0
3,175,057	+		Rru_A2742	0.50	+2.1
3,175,058	-		Rru_A2742	0.50	+0.8
3,175,058	-		Rru_A2742	0.50	-0.0
3,175,360	+		Rru_A2742	0.70	+0.8
3,175,360	+		Rru_A2742	0.70	+1.3
3,175,360	+		Rru_A2742	0.70	+1.5
3,175,360	+		Rru_A2742	0.70	+1.2
3,175,360	+		Rru_A2742	0.70	-0.0
3,175,361	-		Rru_A2742	0.70	+0.4
3,175,361	-		Rru_A2742	0.70	+0.4
3,175,361	-		Rru_A2742	0.70	-0.2
3,175,361	-		Rru_A2742	0.70	-0.0
3,175,361	-		Rru_A2742	0.70	+0.8
3,175,522	+		Rru_A2742	0.80	+1.0
3,175,522	+		Rru_A2742	0.80	+0.0
3,175,523	-		Rru_A2742	0.81	-0.0
3,175,523	-		Rru_A2742	0.81	-1.6
3,175,523	-		Rru_A2742	0.81	+0.0
3,175,740	-				+0.1
3,175,828	+				+2.0
3,175,828	+				+0.3
3,175,829	-				+0.7
3,175,829	-				-0.1
3,175,864	+				-0.0
3,175,864	+				-0.0
3,175,864	+				-0.0
3,175,865	-				+0.4
3,175,865	-				-0.0
3,175,936	+		Rru_A2743	0.11	+0.2
3,175,937	-		Rru_A2743	0.11	+0.4
3,176,061	+		Rru_A2743	0.23	-0.0
3,176,062	-		Rru_A2743	0.23	-0.0
3,176,078	+		Rru_A2743	0.25	-0.0
3,176,078	+		Rru_A2743	0.25	+0.9
3,176,079	-		Rru_A2743	0.25	+0.2
3,176,101	+		Rru_A2743	0.27	+0.0
3,176,101	+		Rru_A2743	0.27	+0.9
3,176,102	-		Rru_A2743	0.27	+0.4
3,176,102	-		Rru_A2743	0.27	-0.0
3,176,200	+		Rru_A2743	0.37	-0.0
3,176,200	+		Rru_A2743	0.37	-0.0
3,176,200	+		Rru_A2743	0.37	+1.1
3,176,200	+		Rru_A2743	0.37	-0.2
3,176,200	+		Rru_A2743	0.37	-0.0
3,176,200	+		Rru_A2743	0.37	-0.0
3,176,201	-		Rru_A2743	0.37	+0.3
3,176,201	-		Rru_A2743	0.37	+0.8
3,176,201	-		Rru_A2743	0.37	+0.5
3,176,408	+		Rru_A2743	0.58	+0.3
3,176,408	+		Rru_A2743	0.58	-0.0
3,176,408	+		Rru_A2743	0.58	+0.5
3,176,408	+		Rru_A2743	0.58	+0.5
3,176,408	+		Rru_A2743	0.58	-1.6
3,176,409	-		Rru_A2743	0.58	+0.9
3,176,409	-		Rru_A2743	0.58	+0.2
3,176,409	-		Rru_A2743	0.58	-1.0
3,176,570	+		Rru_A2743	0.74	+1.0
3,176,573	-		Rru_A2743	0.74	-0.3
3,176,573	-		Rru_A2743	0.74	+0.3
3,176,581	+		Rru_A2743	0.75	+0.7
3,176,582	-		Rru_A2743	0.75	-0.3
3,176,582	-		Rru_A2743	0.75	-0.3
3,176,582	-		Rru_A2743	0.75	+0.4
3,176,651	+		Rru_A2743	0.82	+0.7
3,176,651	+		Rru_A2743	0.82	+0.3
3,176,651	+		Rru_A2743	0.82	-0.0
3,176,651	+		Rru_A2743	0.82	-1.0
3,176,651	+		Rru_A2743	0.82	-0.0
3,176,651	+		Rru_A2743	0.82	-1.0
3,176,652	-		Rru_A2743	0.82	+0.4
3,176,652	-		Rru_A2743	0.82	+1.3
3,176,652	-		Rru_A2743	0.82	+1.5
3,176,652	-		Rru_A2743	0.82	+0.4
3,176,652	-		Rru_A2743	0.82	-0.0
3,176,782	+				-0.0
3,176,783	-				-0.0
3,176,823	+				+0.6
3,176,823	+				+0.7
3,177,003	+		Rru_A2744	0.23	-0.0
3,177,009	+		Rru_A2744	0.24	-0.0
3,177,009	+		Rru_A2744	0.24	-0.0
3,177,009	+		Rru_A2744	0.24	-0.3
3,177,010	-		Rru_A2744	0.24	+1.0
3,177,010	-		Rru_A2744	0.24	+0.9
3,177,016	+		Rru_A2744	0.25	-0.5
3,177,016	+		Rru_A2744	0.25	-1.2
3,177,016	+		Rru_A2744	0.25	-1.0
3,177,017	-		Rru_A2744	0.25	+1.2
3,177,017	-		Rru_A2744	0.25	+0.6
3,177,017	-		Rru_A2744	0.25	-0.5
3,177,018	+		Rru_A2744	0.25	-1.0
3,177,018	+		Rru_A2744	0.25	+0.6
3,177,018	+		Rru_A2744	0.25	+0.0
3,177,064	-		Rru_A2744	0.31	+0.0
3,177,090	+		Rru_A2744	0.35	-1.0
3,177,118	+		Rru_A2744	0.38	-0.3
3,177,119	-		Rru_A2744	0.38	-0.0
3,177,280	+		Rru_A2744	0.60	-0.0
3,177,280	+		Rru_A2744	0.60	+0.2
3,177,281	-		Rru_A2744	0.60	+0.7
3,177,283	-		Rru_A2744	0.60	+0.4
3,177,283	-		Rru_A2744	0.60	+0.0
3,177,283	-		Rru_A2744	0.60	-0.0
3,177,291	+		Rru_A2744	0.61	-0.0
3,177,292	-		Rru_A2744	0.61	-0.0
3,177,309	+		Rru_A2744	0.64	-0.0
3,177,309	+		Rru_A2744	0.64	+0.8
3,177,309	+		Rru_A2744	0.64	-0.0
3,177,309	+		Rru_A2744	0.64	+0.9
3,177,310	-		Rru_A2744	0.64	-0.0
3,177,310	-		Rru_A2744	0.64	-0.0
3,177,370	+		Rru_A2744	0.72	-0.0
3,177,370	+		Rru_A2744	0.72	+0.6
3,177,552	+				+0.7
3,177,552	+				+0.1
3,177,552	+				-0.0
3,177,552	+				-0.0
3,177,552	+				-1.0
3,177,553	-				+0.7
3,177,572	+				+0.6
3,177,710	+		Rru_A2745	0.12	+0.3
3,177,710	+		Rru_A2745	0.12	+0.2
3,177,710	+		Rru_A2745	0.12	+0.5
3,177,710	+		Rru_A2745	0.12	+0.5
3,177,710	+		Rru_A2745	0.12	+0.2
3,177,711	-		Rru_A2745	0.12	+0.8
3,177,711	-		Rru_A2745	0.12	-0.5
3,177,711	-		Rru_A2745	0.12	+0.7
3,177,711	-		Rru_A2745	0.12	-0.0
3,177,711	-		Rru_A2745	0.12	+0.1
3,177,711	-		Rru_A2745	0.12	-1.0
3,177,805	-		Rru_A2745	0.21	+0.8
3,177,805	-		Rru_A2745	0.21	-0.0