Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2735

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,162,258	-				-0.0
3,162,333	+				-0.0
3,162,334	-				-0.2
3,162,745	+		Rru_A2734	0.47	+0.9
3,162,745	+		Rru_A2734	0.47	+0.7
3,162,746	-		Rru_A2734	0.47	+0.4
3,162,746	-		Rru_A2734	0.47	+1.2
3,162,746	-		Rru_A2734	0.47	+0.9
3,162,746	-		Rru_A2734	0.47	-0.0
3,162,746	-		Rru_A2734	0.47	-0.0
3,162,746	-		Rru_A2734	0.47	-0.0
3,162,746	-		Rru_A2734	0.47	+1.3
3,162,886	+		Rru_A2734	0.63	+0.7
3,162,979	+		Rru_A2734	0.73	+1.8
3,162,979	+		Rru_A2734	0.73	-0.0
3,162,979	+		Rru_A2734	0.73	-0.0
3,162,980	-		Rru_A2734	0.73	-1.6
3,162,980	-		Rru_A2734	0.73	+0.8
3,163,010	-		Rru_A2734	0.76	-0.0
3,163,061	+		Rru_A2734	0.82	-0.0
3,163,062	-		Rru_A2734	0.82	-0.0
3,163,062	-		Rru_A2734	0.82	-0.0
3,163,062	-		Rru_A2734	0.82	-0.0
3,163,095	-		Rru_A2734	0.86	+0.2
3,163,267	-				-1.0
3,163,288	-		Rru_A2735	0.11	-0.5
3,163,288	-		Rru_A2735	0.11	-0.0
3,163,380	+		Rru_A2735	0.25	-0.0
3,163,425	+		Rru_A2735	0.32	-0.0
3,163,426	-		Rru_A2735	0.32	+0.4
3,163,426	-		Rru_A2735	0.32	-0.0
3,163,426	-		Rru_A2735	0.32	-1.3
3,163,560	+		Rru_A2735	0.54	-0.7
3,163,560	+		Rru_A2735	0.54	-2.0
3,163,561	-		Rru_A2735	0.54	-0.0
3,163,608	+		Rru_A2735	0.61	-0.0
3,163,608	+		Rru_A2735	0.61	-0.0
3,163,608	+		Rru_A2735	0.61	-0.0
3,163,609	-		Rru_A2735	0.61	+1.1
3,163,609	-		Rru_A2735	0.61	-0.1
3,163,609	-		Rru_A2735	0.61	+0.2
3,163,653	+		Rru_A2735	0.68	+0.2
3,163,653	+		Rru_A2735	0.68	+0.5
3,163,653	+		Rru_A2735	0.68	+0.3
3,163,653	+		Rru_A2735	0.68	-1.0
3,163,653	+		Rru_A2735	0.68	+2.1
3,163,653	+		Rru_A2735	0.68	-0.0
3,163,653	+		Rru_A2735	0.68	+0.4
3,163,653	+		Rru_A2735	0.68	+0.4
3,163,654	-		Rru_A2735	0.68	+0.5
3,163,654	-		Rru_A2735	0.68	-0.5
3,163,654	-		Rru_A2735	0.68	-1.0
3,163,654	-		Rru_A2735	0.68	+0.1
3,163,654	-		Rru_A2735	0.68	-0.0
3,163,654	-		Rru_A2735	0.68	-0.0
3,163,654	-		Rru_A2735	0.68	-0.6
3,163,654	-		Rru_A2735	0.68	-0.0
3,163,707	+		Rru_A2735	0.77	-0.5
3,163,707	+		Rru_A2735	0.77	-0.0
3,163,707	+		Rru_A2735	0.77	-0.0
3,163,708	-		Rru_A2735	0.77	-0.0
3,163,708	-		Rru_A2735	0.77	+0.3
3,164,092	+				-0.0
3,164,092	+				+1.2
3,164,092	+				+1.2
3,164,092	+				-0.0
3,164,092	+				+0.0
3,164,092	+				+1.4
3,164,092	+				+0.5
3,164,092	+				+0.3
3,164,093	-				-0.1
3,164,093	-				-0.0
3,164,093	-				+1.2
3,164,093	-				+1.7
3,164,093	-				+0.2
3,164,093	-				-1.0
3,164,111	-		Rru_A2736	0.10	-0.0
3,164,178	+		Rru_A2736	0.13	-0.0
3,164,179	-		Rru_A2736	0.13	-0.0
3,164,179	-		Rru_A2736	0.13	+1.3
3,164,366	+		Rru_A2736	0.20	-0.0
3,164,366	+		Rru_A2736	0.20	+0.7
3,164,367	-		Rru_A2736	0.20	-0.0
3,164,435	+		Rru_A2736	0.22	-0.0
3,164,495	+		Rru_A2736	0.25	-1.0
3,164,496	-		Rru_A2736	0.25	+0.9
3,164,516	+		Rru_A2736	0.26	-0.0
3,164,516	+		Rru_A2736	0.26	-0.1
3,164,517	-		Rru_A2736	0.26	+0.6
3,164,517	-		Rru_A2736	0.26	+1.0
3,164,694	+		Rru_A2736	0.32	+0.9
3,164,710	+		Rru_A2736	0.33	-0.0
3,164,710	+		Rru_A2736	0.33	+0.1
3,164,710	+		Rru_A2736	0.33	+0.4
3,164,710	+		Rru_A2736	0.33	+0.6
3,164,710	+		Rru_A2736	0.33	-1.0
3,164,710	+		Rru_A2736	0.33	-0.0
3,164,711	-		Rru_A2736	0.33	-0.0
3,164,711	-		Rru_A2736	0.33	-0.0
3,164,711	-		Rru_A2736	0.33	-0.0
3,164,711	-		Rru_A2736	0.33	+0.2
3,164,714	+		Rru_A2736	0.33	+0.1
3,164,714	+		Rru_A2736	0.33	+0.9
3,164,715	-		Rru_A2736	0.33	-0.1
3,164,715	-		Rru_A2736	0.33	+1.2
3,164,715	-		Rru_A2736	0.33	+0.7
3,164,782	+		Rru_A2736	0.36	+1.0
3,164,782	+		Rru_A2736	0.36	+0.2
3,164,782	+		Rru_A2736	0.36	+0.7
3,164,783	-		Rru_A2736	0.36	-0.0
3,164,783	-		Rru_A2736	0.36	-0.0
3,164,783	-		Rru_A2736	0.36	+0.8
3,164,783	-		Rru_A2736	0.36	-0.0
3,164,783	-		Rru_A2736	0.36	+2.0
3,164,783	-		Rru_A2736	0.36	+0.2
3,164,786	+		Rru_A2736	0.36	+0.2
3,164,786	+		Rru_A2736	0.36	+0.1
3,164,787	-		Rru_A2736	0.36	+0.4
3,164,787	-		Rru_A2736	0.36	+0.4
3,164,787	-		Rru_A2736	0.36	+0.7
3,164,787	-		Rru_A2736	0.36	+0.3