Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2731

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,157,354	+				+0.3
3,157,413	+				+0.4
3,157,472	+		Rru_A2730	0.10	+0.2
3,157,473	+		Rru_A2730	0.11	-0.0
3,157,473	+		Rru_A2730	0.11	-0.0
3,157,474	-		Rru_A2730	0.11	-0.0
3,157,474	-		Rru_A2730	0.11	-0.4
3,157,474	-		Rru_A2730	0.11	-0.0
3,157,474	-		Rru_A2730	0.11	-0.0
3,157,474	-		Rru_A2730	0.11	-0.7
3,157,479	+		Rru_A2730	0.13	-0.9
3,157,480	-		Rru_A2730	0.13	+0.6
3,157,480	-		Rru_A2730	0.13	+2.1
3,157,480	-		Rru_A2730	0.13	-1.9
3,157,480	-		Rru_A2730	0.13	+1.5
3,157,554	+		Rru_A2730	0.37	+0.1
3,157,554	+		Rru_A2730	0.37	-0.0
3,157,554	+		Rru_A2730	0.37	-1.0
3,157,554	+		Rru_A2730	0.37	-0.0
3,157,554	+		Rru_A2730	0.37	-0.7
3,157,599	+		Rru_A2730	0.51	-0.1
3,157,599	+		Rru_A2730	0.51	-0.0
3,157,600	-		Rru_A2730	0.51	+0.3
3,157,600	-		Rru_A2730	0.51	-0.0
3,157,600	-		Rru_A2730	0.51	-0.0
3,157,683	+		Rru_A2730	0.77	-0.8
3,157,724	+				-0.0
3,157,724	+				-0.9
3,157,724	+				-0.1
3,157,724	+				-0.0
3,157,724	+				-0.0
3,157,724	+				+1.1
3,157,724	+				-0.2
3,157,724	+				-2.0
3,157,725	-				+0.1
3,157,725	-				-0.2
3,157,725	-				-0.0
3,157,725	-				-1.0
3,157,725	-				-0.0
3,157,725	-				+0.3
3,157,725	-				-1.0
3,157,725	-				-0.0
3,157,725	-				-1.0
3,157,725	-				-0.1
3,157,725	-				-0.0
3,157,725	-				-0.0
3,157,725	-				-0.0
3,157,725	-				-0.0
3,157,728	+				+0.3
3,157,728	+				-0.6
3,157,728	+				+0.7
3,157,728	+				-0.0
3,157,728	+				+0.2
3,157,729	-				-0.0
3,157,729	-				-1.0
3,157,729	-				-0.0
3,157,729	-				-0.0
3,157,789	+				+0.6
3,157,789	+				+0.2
3,157,789	+				-0.2
3,157,789	+				-1.0
3,157,789	+				-1.0
3,157,790	-				-0.0
3,157,790	-				+0.3
3,157,790	-				-0.3
3,158,452	+		Rru_A2731	0.64	-0.0
3,158,453	-		Rru_A2731	0.64	+1.1
3,158,508	+		Rru_A2731	0.73	+0.8
3,158,680	+				+0.6
3,158,680	+				+0.8
3,158,722	+				+1.0
3,158,722	+				+0.8
3,158,723	-				-0.6
3,158,723	-				+0.9
3,158,723	-				+1.0
3,158,779	+				-0.0
3,158,883	-				-0.0
3,159,010	+		Rru_A2732	0.16	+1.4