Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2715

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,136,972	-		Rru_A2714	0.88	+0.8
3,136,972	-		Rru_A2714	0.88	-0.0
3,136,975	+		Rru_A2714	0.88	-0.4
3,137,046	+				+0.5
3,137,072	-				-0.0
3,137,196	-				-0.2
3,137,262	-				-0.0
3,137,454	+				-0.0
3,137,778	+				-0.9
3,137,778	+				-0.9
3,137,779	-				-0.0
3,137,779	-				+0.5
3,137,779	-				-0.0
3,137,785	-				-1.0
3,137,963	+				-0.2
3,137,964	-				-1.6
3,138,006	+				+0.2
3,138,006	+				+0.6
3,138,006	+				-0.1
3,138,007	-				+0.5
3,138,007	-				-0.0
3,138,007	-				-0.0
3,138,007	-				-0.1
3,138,007	-				+0.3
3,138,007	-				-0.8
3,138,007	-				+0.5
3,138,007	-				+0.4
3,138,130	-		Rru_A2715	0.15	-0.0
3,138,275	+		Rru_A2715	0.28	-0.0
3,138,276	-		Rru_A2715	0.28	-0.0
3,138,311	-		Rru_A2715	0.31	-0.3
3,138,322	-		Rru_A2715	0.32	-1.5
3,138,322	-		Rru_A2715	0.32	+1.1
3,138,391	+		Rru_A2715	0.39	-0.0
3,138,487	+		Rru_A2715	0.47	-0.2
3,138,487	+		Rru_A2715	0.47	+0.5
3,138,487	+		Rru_A2715	0.47	-0.5
3,138,488	-		Rru_A2715	0.47	+0.7
3,138,488	-		Rru_A2715	0.47	-0.1
3,138,488	-		Rru_A2715	0.47	-0.1
3,138,488	-		Rru_A2715	0.47	+0.2
3,138,520	+		Rru_A2715	0.50	-0.0
3,138,520	+		Rru_A2715	0.50	+0.1
3,138,520	+		Rru_A2715	0.50	-0.2
3,138,521	-		Rru_A2715	0.50	+0.4
3,138,521	-		Rru_A2715	0.50	+0.4
3,138,563	+		Rru_A2715	0.54	-0.3
3,138,643	+		Rru_A2715	0.61	+0.5
3,138,643	+		Rru_A2715	0.61	-0.1
3,138,643	+		Rru_A2715	0.61	+1.3
3,138,643	+		Rru_A2715	0.61	-0.0
3,138,643	+		Rru_A2715	0.61	-0.0
3,138,644	-		Rru_A2715	0.62	-0.0
3,138,644	-		Rru_A2715	0.62	-0.0
3,138,742	+		Rru_A2715	0.70	-1.1
3,138,742	+		Rru_A2715	0.70	-0.0
3,138,743	-		Rru_A2715	0.70	-0.0
3,138,743	-		Rru_A2715	0.70	-1.0
3,138,743	-		Rru_A2715	0.70	-0.2
3,138,763	+		Rru_A2715	0.72	-0.0
3,138,763	+		Rru_A2715	0.72	+0.1
3,138,763	+		Rru_A2715	0.72	-1.1
3,138,763	+		Rru_A2715	0.72	-0.0
3,138,763	+		Rru_A2715	0.72	-0.0
3,138,764	-		Rru_A2715	0.72	+0.1
3,138,764	-		Rru_A2715	0.72	-0.4
3,138,827	-		Rru_A2715	0.78	+0.4
3,138,833	-		Rru_A2715	0.79	-0.0
3,138,833	-		Rru_A2715	0.79	-0.3
3,138,970	+				+0.7
3,138,971	-				-1.0
3,138,971	-				-0.0
3,139,022	-				+0.5
3,139,022	-				-0.0
3,139,048	+				-1.9
3,139,187	+				-0.0
3,139,187	+				+1.4
3,139,187	+				+0.2
3,139,188	-				-0.8
3,139,188	-				-0.0
3,139,188	-				-1.6
3,139,307	+				+0.2
3,139,405	-				+0.6
3,139,506	+				-0.2
3,139,507	-				+0.7
3,139,507	-				-1.6
3,139,507	-				-0.2
3,139,507	-				-0.5
3,139,507	-				+0.7
3,139,507	-				-1.0
3,139,507	-				+0.8
3,139,507	-				+0.2
3,139,507	-				+0.7
3,139,526	+				+0.3
3,139,527	-				-0.0
3,139,527	-				-0.0
3,139,683	+		Rru_A2716	0.18	-0.7
3,139,684	-		Rru_A2716	0.18	+0.4
3,139,722	+		Rru_A2716	0.21	-0.3
3,139,722	+		Rru_A2716	0.21	+0.4
3,139,738	+		Rru_A2716	0.23	-0.0
3,139,739	-		Rru_A2716	0.23	-1.6
3,139,804	-		Rru_A2716	0.29	+0.8
3,139,804	-		Rru_A2716	0.29	+0.4
3,139,831	-		Rru_A2716	0.31	+0.4
3,139,842	-		Rru_A2716	0.32	+0.9
3,139,842	-		Rru_A2716	0.32	-0.0
3,139,911	+		Rru_A2716	0.39	-0.0
3,140,007	+		Rru_A2716	0.47	-0.0
3,140,007	+		Rru_A2716	0.47	+0.4
3,140,007	+		Rru_A2716	0.47	-0.0
3,140,007	+		Rru_A2716	0.47	-1.6
3,140,008	-		Rru_A2716	0.47	+0.3
3,140,008	-		Rru_A2716	0.47	-0.0
3,140,040	+		Rru_A2716	0.50	-1.6