Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2661

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,089,368	+		Rru_A2660	0.30	+1.4
3,089,368	+		Rru_A2660	0.30	+0.4
3,089,368	+		Rru_A2660	0.30	-0.0
3,089,368	+		Rru_A2660	0.30	+1.1
3,089,368	+		Rru_A2660	0.30	-0.0
3,089,369	-		Rru_A2660	0.30	-0.0
3,089,369	-		Rru_A2660	0.30	-0.0
3,089,369	-		Rru_A2660	0.30	-0.0
3,089,369	-		Rru_A2660	0.30	-0.0
3,089,369	-		Rru_A2660	0.30	-0.3
3,089,369	-		Rru_A2660	0.30	-1.0
3,089,462	-		Rru_A2660	0.37	-1.0
3,089,462	-		Rru_A2660	0.37	-0.0
3,089,503	+		Rru_A2660	0.40	-0.0
3,089,503	+		Rru_A2660	0.40	-0.0
3,089,504	-		Rru_A2660	0.40	-1.0
3,089,504	-		Rru_A2660	0.40	-1.0
3,089,563	+		Rru_A2660	0.45	-0.4
3,089,563	+		Rru_A2660	0.45	-1.4
3,089,563	+		Rru_A2660	0.45	+0.4
3,089,563	+		Rru_A2660	0.45	-0.0
3,089,563	+		Rru_A2660	0.45	-0.0
3,089,563	+		Rru_A2660	0.45	-0.6
3,089,564	-		Rru_A2660	0.45	-0.0
3,089,564	-		Rru_A2660	0.45	+0.6
3,089,564	-		Rru_A2660	0.45	+1.0
3,089,564	-		Rru_A2660	0.45	+0.3
3,089,564	-		Rru_A2660	0.45	+0.5
3,089,564	-		Rru_A2660	0.45	-0.6
3,089,564	-		Rru_A2660	0.45	-1.0
3,089,564	-		Rru_A2660	0.45	-0.4
3,089,588	-		Rru_A2660	0.47	-0.0
3,089,678	+		Rru_A2660	0.53	-0.0
3,089,678	+		Rru_A2660	0.53	+1.1
3,089,679	-		Rru_A2660	0.53	-0.6
3,089,679	-		Rru_A2660	0.53	+2.3
3,089,686	+		Rru_A2660	0.54	+0.5
3,089,687	-		Rru_A2660	0.54	-0.0
3,089,914	+		Rru_A2660	0.71	-0.0
3,089,914	+		Rru_A2660	0.71	-1.0
3,089,914	+		Rru_A2660	0.71	+1.9
3,089,914	+		Rru_A2660	0.71	-0.0
3,089,914	+		Rru_A2660	0.71	-0.0
3,089,915	-		Rru_A2660	0.71	-0.0
3,090,415	-				+0.2
3,090,633	+		Rru_A2661	0.14	+0.4
3,090,633	+		Rru_A2661	0.14	+1.1
3,090,633	+		Rru_A2661	0.14	-0.0
3,090,633	+		Rru_A2661	0.14	-0.0
3,090,633	+		Rru_A2661	0.14	-0.0
3,090,633	+		Rru_A2661	0.14	+0.2
3,090,634	-		Rru_A2661	0.14	-0.0
3,090,634	-		Rru_A2661	0.14	-1.6
3,090,634	-		Rru_A2661	0.14	-0.0
3,090,634	-		Rru_A2661	0.14	-0.0
3,090,634	-		Rru_A2661	0.14	-0.0
3,090,634	-		Rru_A2661	0.14	+2.3
3,090,634	-		Rru_A2661	0.14	+1.2
3,090,634	-		Rru_A2661	0.14	+1.8
3,090,640	+		Rru_A2661	0.15	+0.0
3,090,640	+		Rru_A2661	0.15	-0.0
3,090,641	-		Rru_A2661	0.15	-1.0
3,090,726	+		Rru_A2661	0.19	-0.0
3,090,726	+		Rru_A2661	0.19	-0.0
3,090,727	-		Rru_A2661	0.19	-0.0
3,090,727	-		Rru_A2661	0.19	+0.7
3,090,727	-		Rru_A2661	0.19	+2.3
3,090,738	+		Rru_A2661	0.20	-1.0
3,090,738	+		Rru_A2661	0.20	-0.0
3,090,739	-		Rru_A2661	0.20	+0.1
3,090,739	-		Rru_A2661	0.20	-1.0
3,090,931	+		Rru_A2661	0.30	-1.0
3,090,931	+		Rru_A2661	0.30	+0.6
3,090,931	+		Rru_A2661	0.30	-0.0
3,090,932	-		Rru_A2661	0.30	-0.2
3,091,230	+		Rru_A2661	0.45	-0.0
3,091,230	+		Rru_A2661	0.45	-0.0
3,091,231	-		Rru_A2661	0.45	-0.0
3,091,231	-		Rru_A2661	0.45	-0.0
3,091,347	+		Rru_A2661	0.51	-0.0
3,091,578	+		Rru_A2661	0.63	+0.5
3,091,579	-		Rru_A2661	0.63	+0.9
3,091,579	-		Rru_A2661	0.63	+1.4
3,091,614	+		Rru_A2661	0.65	+0.8
3,091,615	-		Rru_A2661	0.65	+1.4
3,091,615	-		Rru_A2661	0.65	+1.5
3,091,648	+		Rru_A2661	0.67	-0.0
3,091,648	+		Rru_A2661	0.67	+0.5
3,091,649	-		Rru_A2661	0.67	+1.5
3,091,649	-		Rru_A2661	0.67	+1.2
3,091,737	+		Rru_A2661	0.71	-0.0
3,091,737	+		Rru_A2661	0.71	+0.4
3,091,935	+		Rru_A2661	0.82	+1.3
3,091,935	+		Rru_A2661	0.82	-0.0
3,091,935	+		Rru_A2661	0.82	-0.0
3,091,935	+		Rru_A2661	0.82	-0.9
3,091,935	+		Rru_A2661	0.82	-0.0
3,091,936	-		Rru_A2661	0.82	+0.3
3,091,936	-		Rru_A2661	0.82	+1.0
3,091,936	-		Rru_A2661	0.82	-0.0
3,091,986	+		Rru_A2661	0.84	+0.0
3,092,028	+		Rru_A2661	0.86	+0.4
3,092,029	-		Rru_A2661	0.86	+1.1
3,092,029	-		Rru_A2661	0.86	+0.1
3,092,029	-		Rru_A2661	0.86	-0.0
3,092,299	+				+0.9
3,092,299	+				+0.7
3,092,300	-				+0.3
3,092,300	-				-0.6
3,092,300	-				-0.0
3,092,634	+		Rru_A2662	0.17	-0.0
3,092,685	+		Rru_A2662	0.20	-0.0
3,092,685	+		Rru_A2662	0.20	+0.2
3,092,736	+		Rru_A2662	0.24	-0.4
3,092,736	+		Rru_A2662	0.24	-0.0
3,092,736	+		Rru_A2662	0.24	+0.7
3,092,736	+		Rru_A2662	0.24	-2.0
3,092,737	-		Rru_A2662	0.24	-0.0
3,092,737	-		Rru_A2662	0.24	-0.0
3,092,737	-		Rru_A2662	0.24	-0.0
3,092,737	-		Rru_A2662	0.24	+0.6
3,093,092	+		Rru_A2662	0.48	+0.1