Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2657

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,084,793	-		Rru_A2656	0.89	-0.3
3,084,793	-		Rru_A2656	0.89	+1.2
3,084,793	-		Rru_A2656	0.89	+0.3
3,084,885	-				+0.2
3,084,885	-				-2.6
3,084,910	+				+1.0
3,084,957	+				+1.0
3,084,957	+				+1.3
3,084,957	+				+2.1
3,084,958	-				+1.3
3,084,958	-				+0.8
3,084,958	-				-0.0
3,084,958	-				+1.2
3,084,958	-				+1.1
3,084,958	-				+1.4
3,084,958	-				+1.5
3,085,312	+		Rru_A2657	0.15	-0.3
3,085,312	+		Rru_A2657	0.15	-0.0
3,085,312	+		Rru_A2657	0.15	-0.0
3,085,312	+		Rru_A2657	0.15	+0.3
3,085,312	+		Rru_A2657	0.15	+0.8
3,085,312	+		Rru_A2657	0.15	-0.0
3,085,313	-		Rru_A2657	0.15	-1.6
3,085,313	-		Rru_A2657	0.15	-0.0
3,085,313	-		Rru_A2657	0.15	+1.5
3,085,313	-		Rru_A2657	0.15	+1.4
3,085,313	-		Rru_A2657	0.15	+1.8
3,085,313	-		Rru_A2657	0.15	+0.8
3,085,313	-		Rru_A2657	0.15	-0.0
3,085,501	-		Rru_A2657	0.24	-0.0
3,086,327	+		Rru_A2657	0.61	+0.8
3,086,328	-		Rru_A2657	0.61	+1.3
3,086,423	+		Rru_A2657	0.65	-0.0
3,086,486	+		Rru_A2657	0.68	-0.0
3,086,505	-		Rru_A2657	0.69	+1.5
3,086,639	+		Rru_A2657	0.75	+0.9
3,086,640	-		Rru_A2657	0.75	-1.0
3,086,641	+		Rru_A2657	0.75	-0.0
3,086,641	+		Rru_A2657	0.75	+0.2
3,086,641	+		Rru_A2657	0.75	-0.0
3,086,641	+		Rru_A2657	0.75	+1.6
3,086,641	+		Rru_A2657	0.75	+0.1
3,086,641	+		Rru_A2657	0.75	+0.9
3,086,641	+		Rru_A2657	0.75	-0.0
3,086,641	+		Rru_A2657	0.75	+0.4
3,086,642	-		Rru_A2657	0.75	+0.4
3,086,642	-		Rru_A2657	0.75	+1.0
3,086,879	+		Rru_A2657	0.86	-0.0
3,086,879	+		Rru_A2657	0.86	+0.3
3,086,879	+		Rru_A2657	0.86	+0.8
3,087,090	-				+0.5
3,087,090	-				+0.9
3,087,091	+				+1.3
3,087,091	+				-0.1
3,087,091	+				-0.2
3,087,091	+				-0.4
3,087,091	+				-0.4
3,087,091	+				-0.0
3,087,091	+				+1.7
3,087,092	-				-1.0
3,087,092	-				+0.3
3,087,092	-				+0.7
3,087,092	-				-0.0
3,087,092	-				+0.3
3,087,195	+				+0.4
3,087,195	+				+0.1
3,087,196	-				-1.0
3,087,196	-				+0.4
3,087,323	+		Rru_A2658	0.17	+0.2
3,087,380	+		Rru_A2658	0.25	+0.6
3,087,380	+		Rru_A2658	0.25	-0.0
3,087,380	+		Rru_A2658	0.25	+1.6
3,087,380	+		Rru_A2658	0.25	+0.1
3,087,380	+		Rru_A2658	0.25	+0.7
3,087,380	+		Rru_A2658	0.25	+0.5
3,087,380	+		Rru_A2658	0.25	-0.0
3,087,380	+		Rru_A2658	0.25	-1.0
3,087,380	+		Rru_A2658	0.25	+1.0
3,087,380	+		Rru_A2658	0.25	+0.8
3,087,380	+		Rru_A2658	0.25	+0.1
3,087,380	+		Rru_A2658	0.25	-0.0
3,087,380	+		Rru_A2658	0.25	-0.4
3,087,380	+		Rru_A2658	0.25	+0.5
3,087,381	-		Rru_A2658	0.25	-0.0
3,087,381	-		Rru_A2658	0.25	-0.0
3,087,381	-		Rru_A2658	0.25	+0.4
3,087,381	-		Rru_A2658	0.25	-1.0
3,087,381	-		Rru_A2658	0.25	-0.0
3,087,381	-		Rru_A2658	0.25	+0.1
3,087,381	-		Rru_A2658	0.25	+0.7
3,087,381	-		Rru_A2658	0.25	+0.7
3,087,381	-		Rru_A2658	0.25	+0.3
3,087,381	-		Rru_A2658	0.25	-0.0
3,087,381	-		Rru_A2658	0.25	-0.0
3,087,381	-		Rru_A2658	0.25	+0.7
3,087,381	-		Rru_A2658	0.25	-0.0
3,087,381	-		Rru_A2658	0.25	+0.5
3,087,381	-		Rru_A2658	0.25	+0.1
3,087,381	-		Rru_A2658	0.25	+1.0
3,087,381	-		Rru_A2658	0.25	+0.7
3,087,381	-		Rru_A2658	0.25	+0.3
3,087,439	-		Rru_A2658	0.33	-1.6
3,087,439	-		Rru_A2658	0.33	-0.0
3,087,439	-		Rru_A2658	0.33	+0.3
3,087,526	+		Rru_A2658	0.45	-0.0
3,087,527	-		Rru_A2658	0.45	+0.8
3,087,637	-		Rru_A2658	0.61	+1.2
3,087,675	+		Rru_A2658	0.66	+0.3
3,087,676	-		Rru_A2658	0.66	-1.0
3,087,676	-		Rru_A2658	0.66	+0.7
3,087,677	+		Rru_A2658	0.66	+3.8
3,087,677	+		Rru_A2658	0.66	-0.0
3,087,678	-		Rru_A2658	0.67	+1.0
3,087,678	-		Rru_A2658	0.67	+0.1
3,087,678	-		Rru_A2658	0.67	-0.0
3,087,847	-				-0.0
3,088,125	-		Rru_A2659	0.21	-0.0