Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2629

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,057,517	+				-0.0
3,057,517	+				-0.0
3,057,517	+				+2.8
3,057,517	+				-0.0
3,057,517	+				-0.0
3,057,518	-				-0.0
3,057,518	-				+0.2
3,057,518	-				+0.2
3,057,877	+		Rru_A2628	0.43	+0.0
3,057,937	+		Rru_A2628	0.49	+0.8
3,057,937	+		Rru_A2628	0.49	+1.1
3,057,937	+		Rru_A2628	0.49	+0.5
3,057,938	-		Rru_A2628	0.49	+0.9
3,057,938	-		Rru_A2628	0.49	-0.0
3,057,969	-		Rru_A2628	0.52	+1.0
3,058,322	+		Rru_A2628	0.88	-0.0
3,058,322	+		Rru_A2628	0.88	+1.0
3,058,323	-		Rru_A2628	0.89	+0.4
3,058,323	-		Rru_A2628	0.89	+0.6
3,058,323	-		Rru_A2628	0.89	+0.5
3,058,323	-		Rru_A2628	0.89	-0.2
3,058,375	+				-0.0
3,058,376	-				+1.6
3,058,430	+				-1.6
3,058,432	+				-0.0
3,058,559	+		Rru_A2629	0.11	-0.3
3,058,559	+		Rru_A2629	0.11	-0.4
3,058,559	+		Rru_A2629	0.11	-0.0
3,058,648	-		Rru_A2629	0.20	-0.0
3,058,820	+		Rru_A2629	0.36	+0.6
3,058,820	+		Rru_A2629	0.36	-0.0
3,058,821	-		Rru_A2629	0.36	-0.0
3,058,821	-		Rru_A2629	0.36	+1.0
3,059,071	+		Rru_A2629	0.61	-0.0
3,059,072	-		Rru_A2629	0.61	-0.0
3,059,072	-		Rru_A2629	0.61	+1.6
3,059,072	-		Rru_A2629	0.61	-0.5
3,059,131	+		Rru_A2629	0.67	-0.0
3,059,131	+		Rru_A2629	0.67	+2.2
3,059,131	+		Rru_A2629	0.67	-1.2
3,059,131	+		Rru_A2629	0.67	-0.0
3,059,131	+		Rru_A2629	0.67	-0.6
3,059,131	+		Rru_A2629	0.67	-0.3
3,059,131	+		Rru_A2629	0.67	-0.0
3,059,132	-		Rru_A2629	0.67	-0.0
3,059,132	-		Rru_A2629	0.67	+0.3
3,059,201	+		Rru_A2629	0.73	-0.0
3,059,201	+		Rru_A2629	0.73	+0.6
3,059,202	-		Rru_A2629	0.73	-0.0
3,059,238	+		Rru_A2629	0.77	+1.3
3,059,294	+		Rru_A2629	0.82	-0.9
3,059,294	+		Rru_A2629	0.82	-0.0
3,059,295	-		Rru_A2629	0.83	-0.6
3,059,295	-		Rru_A2629	0.83	+0.4
3,059,295	-		Rru_A2629	0.83	-0.0
3,059,360	+		Rru_A2629	0.89	+0.1
3,059,360	+		Rru_A2629	0.89	-0.0
3,059,360	+		Rru_A2629	0.89	-0.0
3,059,361	-		Rru_A2629	0.89	+0.2
3,059,361	-		Rru_A2629	0.89	+0.3
3,059,361	-		Rru_A2629	0.89	+0.3
3,059,361	-		Rru_A2629	0.89	-0.0
3,059,659	+				-0.3
3,059,659	+				-2.4
3,059,660	-				-0.4
3,059,660	-				-0.6
3,059,660	-				+0.0
3,060,177	+		Rru_A2630	0.56	-1.2
3,060,177	+		Rru_A2630	0.56	-1.2
3,060,177	+		Rru_A2630	0.56	-0.0
3,060,178	-		Rru_A2630	0.56	+0.2
3,060,178	-		Rru_A2630	0.56	-0.0
3,060,178	-		Rru_A2630	0.56	-0.0
3,060,178	-		Rru_A2630	0.56	-0.0
3,060,178	-		Rru_A2630	0.56	-1.5
3,060,371	+		Rru_A2630	0.77	-0.0
3,060,371	+		Rru_A2630	0.77	-0.0
3,060,429	+		Rru_A2630	0.83	-0.0