Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2625

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,054,132	-				+0.2
3,054,132	-				+1.0
3,054,132	-				+0.9
3,054,184	-				+0.9
3,054,184	-				+0.5
3,054,207	-				+0.6
3,054,207	-				+0.9
3,054,207	-				-0.0
3,054,207	-				+1.3
3,054,409	-		Rru_A2625	0.13	+1.1
3,054,410	+		Rru_A2625	0.13	-0.0
3,054,410	+		Rru_A2625	0.13	-0.6
3,054,411	-		Rru_A2625	0.13	+0.7
3,054,715	-		Rru_A2625	0.36	-0.0
3,054,715	-		Rru_A2625	0.36	+0.7
3,054,755	+		Rru_A2625	0.39	-0.0
3,054,755	+		Rru_A2625	0.39	-0.0
3,054,756	-		Rru_A2625	0.39	-0.0
3,054,756	-		Rru_A2625	0.39	-0.0
3,054,775	-		Rru_A2625	0.41	+1.7
3,054,775	-		Rru_A2625	0.41	-1.2
3,054,885	+		Rru_A2625	0.49	+0.5
3,054,885	+		Rru_A2625	0.49	-0.0
3,054,885	+		Rru_A2625	0.49	+0.7
3,054,885	+		Rru_A2625	0.49	+0.2
3,054,885	+		Rru_A2625	0.49	-0.0
3,054,885	+		Rru_A2625	0.49	-0.0
3,054,886	-		Rru_A2625	0.49	-0.6
3,054,886	-		Rru_A2625	0.49	+0.6
3,054,886	-		Rru_A2625	0.49	-0.0
3,054,886	-		Rru_A2625	0.49	+0.0
3,054,886	-		Rru_A2625	0.49	-0.1
3,054,887	+		Rru_A2625	0.49	+0.5
3,054,887	+		Rru_A2625	0.49	-0.1
3,054,887	+		Rru_A2625	0.49	+1.3
3,054,887	+		Rru_A2625	0.49	+1.6
3,054,887	+		Rru_A2625	0.49	-0.0
3,054,887	+		Rru_A2625	0.49	-0.0
3,054,887	+		Rru_A2625	0.49	+0.5
3,054,888	-		Rru_A2625	0.49	-1.0
3,054,888	-		Rru_A2625	0.49	-0.0
3,054,888	-		Rru_A2625	0.49	+0.8
3,054,888	-		Rru_A2625	0.49	+1.4
3,054,888	-		Rru_A2625	0.49	-0.1
3,055,008	+		Rru_A2625	0.58	-0.4
3,055,008	+		Rru_A2625	0.58	+1.2
3,055,008	+		Rru_A2625	0.58	+1.1
3,055,008	+		Rru_A2625	0.58	-0.0
3,055,009	-		Rru_A2625	0.58	-0.0
3,055,020	+		Rru_A2625	0.59	-0.7
3,055,062	+		Rru_A2625	0.62	-0.0
3,055,062	+		Rru_A2625	0.62	+0.3
3,055,062	+		Rru_A2625	0.62	-0.0
3,055,062	+		Rru_A2625	0.62	+0.6
3,055,062	+		Rru_A2625	0.62	+0.6
3,055,062	+		Rru_A2625	0.62	+0.5
3,055,063	-		Rru_A2625	0.62	-0.5
3,055,063	-		Rru_A2625	0.62	-0.0
3,055,063	-		Rru_A2625	0.62	+0.6
3,055,063	-		Rru_A2625	0.62	+1.5
3,055,063	-		Rru_A2625	0.62	+0.5
3,055,066	+		Rru_A2625	0.63	+2.4
3,055,066	+		Rru_A2625	0.63	+0.8
3,055,066	+		Rru_A2625	0.63	-0.0
3,055,066	+		Rru_A2625	0.63	+0.6
3,055,066	+		Rru_A2625	0.63	-0.0
3,055,066	+		Rru_A2625	0.63	-0.0
3,055,067	-		Rru_A2625	0.63	+1.2
3,055,067	-		Rru_A2625	0.63	+0.7
3,055,067	-		Rru_A2625	0.63	-1.6
3,055,491	+				+1.1
3,055,492	-				-0.0
3,055,556	-				-0.0
3,055,556	-				-0.0
3,055,557	+				+2.0
3,055,557	+				-0.0
3,055,558	-				+1.2
3,055,558	-				+0.5
3,055,558	-				+1.4
3,055,558	-				+1.2
3,055,558	-				+0.3
3,056,297	-		Rru_A2626	0.74	-0.0
3,056,398	+		Rru_A2626	0.84	-0.0
3,056,399	-		Rru_A2626	0.84	-0.0
3,056,399	-		Rru_A2626	0.84	-0.0
3,056,411	+		Rru_A2626	0.86	-0.0
3,056,412	-		Rru_A2626	0.86	-1.6
3,056,486	-				+0.9
3,056,486	-				+1.0
3,056,537	+				-0.0
3,056,538	-				+1.1
3,056,538	-				-1.4
3,056,539	+				-0.0
3,056,540	-				-0.0
3,056,556	+				+0.4
3,056,556	+				-0.0
3,056,556	+				-0.0
3,056,556	+				-0.0
3,056,557	-				-0.3
3,056,557	-				+0.6
3,056,557	-				-1.0