Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2619
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
3,046,169 | + | Rru_A2618 | 0.14 | -0.0 | |
3,047,708 | + | Rru_A2619 | 0.36 | +0.6 | |
3,047,708 | + | Rru_A2619 | 0.36 | +1.4 | |
3,047,708 | + | Rru_A2619 | 0.36 | +2.4 | |
3,047,763 | - | Rru_A2619 | 0.39 | +3.6 | |
3,047,763 | - | Rru_A2619 | 0.39 | +3.4 | |
3,047,766 | - | Rru_A2619 | 0.39 | -0.0 | |
3,047,766 | - | Rru_A2619 | 0.39 | +4.1 | |
3,047,984 | + | Rru_A2619 | 0.50 | +1.2 | |
3,047,984 | + | Rru_A2619 | 0.50 | +0.4 | |
3,047,984 | + | Rru_A2619 | 0.50 | +1.6 | |
3,047,986 | + | Rru_A2619 | 0.50 | +1.0 | |
3,047,986 | + | Rru_A2619 | 0.50 | -0.4 | |
3,049,204 | - | Rru_A2620 | 0.31 | +2.6 | |
3,049,215 | + | Rru_A2620 | 0.32 | +3.0 | |
3,049,328 | - | Rru_A2620 | 0.47 | +1.8 | |
3,049,328 | - | Rru_A2620 | 0.47 | -0.0 | |
3,049,328 | - | Rru_A2620 | 0.47 | +2.5 | |
3,049,816 | + | -0.3 | |||
3,049,817 | - | -0.0 | |||
3,049,817 | - | -0.0 |
Or see this region's nucleotide sequence