Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2612

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,038,479	+				+0.1
3,038,553	+				+1.0
3,038,584	-				+0.3
3,038,584	-				-0.0
3,038,641	+				-0.0
3,038,641	+				+0.5
3,038,642	-				-0.0
3,038,647	+				-0.0
3,038,647	+				+0.9
3,038,648	-				-1.4
3,038,662	+				-0.5
3,038,734	-				-0.0
3,038,734	-				-0.0
3,038,734	-				-1.0
3,039,458	+				-0.1
3,039,458	+				-0.0
3,039,561	-				-0.0
3,039,569	-		Rru_A2612	0.11	-2.0
3,040,204	+		Rru_A2612	0.83	-0.0
3,040,204	+		Rru_A2612	0.83	+0.3
3,040,205	-		Rru_A2612	0.83	+0.9
3,040,205	-		Rru_A2612	0.83	-0.0
3,040,329	-				-0.0
3,040,373	+				-0.0
3,040,379	+				-0.0
3,040,399	+				+0.3
3,040,445	-				-0.0
3,040,623	+		Rru_A2613	0.12	-0.0
3,040,772	+		Rru_A2613	0.22	+0.3
3,040,772	+		Rru_A2613	0.22	-1.2
3,040,772	+		Rru_A2613	0.22	-0.2
3,040,773	-		Rru_A2613	0.22	-0.7
3,040,773	-		Rru_A2613	0.22	-0.0
3,040,773	-		Rru_A2613	0.22	+0.1
3,040,773	-		Rru_A2613	0.22	-0.2
3,040,797	+		Rru_A2613	0.24	+0.4
3,040,797	+		Rru_A2613	0.24	+0.4
3,040,797	+		Rru_A2613	0.24	-1.0
3,040,797	+		Rru_A2613	0.24	-0.2
3,040,797	+		Rru_A2613	0.24	+0.0
3,040,797	+		Rru_A2613	0.24	-0.0
3,040,798	-		Rru_A2613	0.24	-1.6
3,040,798	-		Rru_A2613	0.24	+0.4
3,040,799	+		Rru_A2613	0.24	-0.3
3,040,800	-		Rru_A2613	0.24	+0.2
3,040,800	-		Rru_A2613	0.24	+0.1
3,040,985	+		Rru_A2613	0.36	-0.2
3,040,985	+		Rru_A2613	0.36	-0.5
3,040,986	-		Rru_A2613	0.36	-0.0
3,040,986	-		Rru_A2613	0.36	+0.3
3,040,986	-		Rru_A2613	0.36	-1.6
3,040,986	-		Rru_A2613	0.36	-1.6
3,040,986	-		Rru_A2613	0.36	-0.4
3,040,986	-		Rru_A2613	0.36	+0.8
3,041,006	+		Rru_A2613	0.37	-0.0
3,041,157	+		Rru_A2613	0.47	-1.0
3,041,157	+		Rru_A2613	0.47	-1.0
3,041,157	+		Rru_A2613	0.47	-0.2
3,041,158	-		Rru_A2613	0.47	+0.3
3,041,158	-		Rru_A2613	0.47	-1.0
3,041,159	+		Rru_A2613	0.47	+0.2
3,041,160	-		Rru_A2613	0.47	+0.2
3,041,160	-		Rru_A2613	0.47	-0.0
3,041,160	-		Rru_A2613	0.47	-0.5
3,041,234	+		Rru_A2613	0.52	-0.0
3,041,235	-		Rru_A2613	0.52	-0.0
3,041,235	-		Rru_A2613	0.52	-0.0
3,041,235	-		Rru_A2613	0.52	-0.0
3,041,313	+		Rru_A2613	0.57	-0.0
3,041,313	+		Rru_A2613	0.57	-1.0
3,041,313	+		Rru_A2613	0.57	+1.0