Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2610

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,033,938	+				-0.1
3,034,378	-		Rru_A2609	0.58	-0.0
3,034,811	+				-0.0
3,034,811	+				-0.2
3,034,862	+				-0.0
3,034,862	+				+0.7
3,034,862	+				+0.5
3,034,862	+				-0.0
3,034,863	-				-0.0
3,034,863	-				+1.1
3,034,863	-				-0.0
3,034,881	+				-0.3
3,034,932	-				-0.0
3,034,969	+				-0.0
3,034,970	-				+1.0
3,035,017	+				+0.2
3,035,018	-				+1.0
3,035,020	+				+0.2
3,035,021	-				-0.0
3,035,021	-				-0.0
3,035,021	-				-1.6
3,035,158	+				-0.0
3,035,158	+				+1.1
3,035,159	-				+0.5
3,035,159	-				+1.2
3,035,159	-				+0.6
3,035,159	-				-0.0
3,035,159	-				-0.3
3,035,159	-				-0.0
3,035,159	-				+0.3
3,035,159	-				-0.0
3,035,444	-		Rru_A2610	0.15	+0.4
3,035,444	-		Rru_A2610	0.15	+0.5
3,035,533	+		Rru_A2610	0.17	-0.2
3,035,533	+		Rru_A2610	0.17	-1.5
3,035,534	-		Rru_A2610	0.17	+0.1
3,035,554	+		Rru_A2610	0.18	-0.9
3,035,555	-		Rru_A2610	0.18	+1.5
3,035,716	+		Rru_A2610	0.22	+0.2
3,035,717	-		Rru_A2610	0.22	-0.0
3,035,717	-		Rru_A2610	0.22	-0.0
3,036,250	+		Rru_A2610	0.35	+0.1
3,036,251	-		Rru_A2610	0.35	-0.5
3,036,349	+		Rru_A2610	0.38	+0.4
3,036,349	+		Rru_A2610	0.38	-0.0
3,036,424	+		Rru_A2610	0.40	-2.0
3,036,425	-		Rru_A2610	0.40	+0.7
3,036,425	-		Rru_A2610	0.40	+1.0
3,036,425	-		Rru_A2610	0.40	-0.0
3,036,752	+		Rru_A2610	0.48	+0.2
3,036,793	+		Rru_A2610	0.49	-0.0
3,036,794	-		Rru_A2610	0.49	-1.0
3,036,794	-		Rru_A2610	0.49	+0.6
3,036,834	+		Rru_A2610	0.50	+0.3
3,036,835	-		Rru_A2610	0.50	+0.4
3,036,958	-		Rru_A2610	0.53	-0.0
3,037,047	+		Rru_A2610	0.55	+0.0
3,037,159	+		Rru_A2610	0.58	-0.0
3,037,159	+		Rru_A2610	0.58	+1.9
3,037,159	+		Rru_A2610	0.58	-0.0
3,037,159	+		Rru_A2610	0.58	-0.0
3,037,159	+		Rru_A2610	0.58	-0.0
3,037,159	+		Rru_A2610	0.58	+0.5
3,037,159	+		Rru_A2610	0.58	+0.3
3,037,159	+		Rru_A2610	0.58	-0.8
3,037,159	+		Rru_A2610	0.58	+0.2
3,037,160	-		Rru_A2610	0.58	+0.5
3,037,160	-		Rru_A2610	0.58	+0.3
3,037,160	-		Rru_A2610	0.58	+1.1
3,037,160	-		Rru_A2610	0.58	-0.0
3,037,160	-		Rru_A2610	0.58	+0.4
3,037,160	-		Rru_A2610	0.58	-0.0
3,037,160	-		Rru_A2610	0.58	+0.9
3,037,506	+		Rru_A2610	0.67	-0.0
3,037,506	+		Rru_A2610	0.67	-0.2
3,037,506	+		Rru_A2610	0.67	-0.0
3,037,726	-		Rru_A2610	0.73	-1.6
3,037,726	-		Rru_A2610	0.73	-0.0
3,037,726	-		Rru_A2610	0.73	+0.5
3,037,737	+		Rru_A2610	0.73	+1.2
3,037,738	-		Rru_A2610	0.73	+0.2
3,037,738	-		Rru_A2610	0.73	+0.7
3,037,738	-		Rru_A2610	0.73	-0.2
3,037,893	+		Rru_A2610	0.77	+0.8
3,037,918	+		Rru_A2610	0.77	+0.6
3,037,918	+		Rru_A2610	0.77	+0.5
3,037,918	+		Rru_A2610	0.77	-0.0
3,037,919	-		Rru_A2610	0.77	-0.0
3,037,919	-		Rru_A2610	0.77	+0.0
3,037,919	-		Rru_A2610	0.77	+0.5
3,037,919	-		Rru_A2610	0.77	+0.0
3,037,919	-		Rru_A2610	0.77	+0.1
3,037,930	-		Rru_A2610	0.78	+0.1
3,037,969	+		Rru_A2610	0.79	-0.1
3,037,970	-		Rru_A2610	0.79	-0.0
3,037,970	-		Rru_A2610	0.79	+1.0
3,037,970	-		Rru_A2610	0.79	-1.1
3,037,986	+		Rru_A2610	0.79	-0.0
3,038,067	+		Rru_A2610	0.81	+0.2
3,038,068	-		Rru_A2610	0.81	+0.2
3,038,100	+		Rru_A2610	0.82	-0.0
3,038,127	+		Rru_A2610	0.83	+1.2
3,038,127	+		Rru_A2610	0.83	-0.0
3,038,127	+		Rru_A2610	0.83	-0.0
3,038,131	+		Rru_A2610	0.83	-1.0
3,038,131	+		Rru_A2610	0.83	-0.0
3,038,131	+		Rru_A2610	0.83	-0.0
3,038,131	+		Rru_A2610	0.83	-0.0
3,038,131	+		Rru_A2610	0.83	-0.0
3,038,131	+		Rru_A2610	0.83	+0.9
3,038,132	-		Rru_A2610	0.83	-0.0
3,038,132	-		Rru_A2610	0.83	-0.0
3,038,132	-		Rru_A2610	0.83	-0.3
3,038,132	-		Rru_A2610	0.83	+0.9
3,038,132	-		Rru_A2610	0.83	+0.0
3,038,236	+		Rru_A2610	0.86	-0.0
3,038,236	+		Rru_A2610	0.86	-0.0
3,038,236	+		Rru_A2610	0.86	+0.4
3,038,236	+		Rru_A2610	0.86	-1.0
3,038,236	+		Rru_A2610	0.86	+0.7
3,038,237	-		Rru_A2610	0.86	-0.0
3,038,237	-		Rru_A2610	0.86	-0.0
3,038,237	-		Rru_A2610	0.86	+0.3
3,038,237	-		Rru_A2610	0.86	-0.4
3,038,294	+		Rru_A2610	0.87	-0.5
3,038,298	+		Rru_A2610	0.87	-0.0
3,038,299	-		Rru_A2610	0.87	+1.1
3,038,299	-		Rru_A2610	0.87	+0.7
3,038,404	-		Rru_A2610	0.90	-0.2
3,038,404	-		Rru_A2610	0.90	+1.6
3,038,474	+				-0.0
3,038,479	+				+0.1
3,038,553	+				+1.0
3,038,584	-				+0.3
3,038,584	-				-0.0
3,038,641	+				-0.0
3,038,641	+				+0.5
3,038,642	-				-0.0
3,038,647	+				-0.0
3,038,647	+				+0.9
3,038,648	-				-1.4
3,038,662	+				-0.5
3,038,734	-				-0.0
3,038,734	-				-0.0
3,038,734	-				-1.0
3,039,458	+				-0.1
3,039,458	+				-0.0
3,039,561	-				-0.0
3,039,569	-		Rru_A2612	0.11	-2.0