Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2596

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,016,660	+		Rru_A2594	0.88	-0.0
3,016,661	-		Rru_A2594	0.88	-0.0
3,016,673	+		Rru_A2594	0.89	-1.0
3,016,674	-		Rru_A2594	0.89	+0.6
3,016,674	-		Rru_A2594	0.89	-0.0
3,016,675	+		Rru_A2594	0.89	+0.1
3,016,675	+		Rru_A2594	0.89	+1.0
3,016,845	+				+0.6
3,016,845	+				-0.0
3,016,878	+				+0.7
3,016,979	+				+0.8
3,016,979	+				-0.0
3,016,979	+				+0.8
3,016,979	+				+0.3
3,016,979	+				+0.3
3,016,980	-				-0.0
3,016,980	-				+0.3
3,016,980	-				-0.0
3,016,980	-				-0.0
3,016,998	+				+0.7
3,016,998	+				-1.6
3,016,999	-				-0.1
3,016,999	-				+0.6
3,017,009	+				+0.7
3,017,009	+				-0.4
3,017,010	-				-0.0
3,017,012	+				+2.1
3,017,012	+				+1.2
3,017,013	-				-0.0
3,017,013	-				-0.0
3,017,072	-				-0.0
3,017,094	+				+1.4
3,017,094	+				+0.4
3,017,094	+				-0.0
3,017,117	-				+0.2
3,017,117	-				-1.1
3,017,117	-				-0.0
3,017,233	+		Rru_A2595	0.20	-0.0
3,017,233	+		Rru_A2595	0.20	-0.0
3,017,233	+		Rru_A2595	0.20	-0.0
3,017,233	+		Rru_A2595	0.20	-1.0
3,017,233	+		Rru_A2595	0.20	+2.6
3,017,234	-		Rru_A2595	0.20	-0.0
3,017,234	-		Rru_A2595	0.20	+0.6
3,017,234	-		Rru_A2595	0.20	-0.0
3,017,234	-		Rru_A2595	0.20	-0.0
3,017,234	-		Rru_A2595	0.20	-0.0
3,017,234	-		Rru_A2595	0.20	-0.0
3,017,478	+		Rru_A2595	0.72	-1.0
3,017,590	+				-0.3
3,017,590	+				-0.0
3,017,590	+				-0.1
3,017,591	-				-0.0
3,017,690	+		Rru_A2596	0.10	+0.1
3,017,690	+		Rru_A2596	0.10	+0.2
3,017,690	+		Rru_A2596	0.10	-0.0
3,017,690	+		Rru_A2596	0.10	-0.0
3,017,691	-		Rru_A2596	0.10	-0.0
3,017,691	-		Rru_A2596	0.10	-0.6
3,017,794	+		Rru_A2596	0.23	-1.6
3,017,869	+		Rru_A2596	0.31	-0.0
3,017,870	-		Rru_A2596	0.32	-0.4
3,018,225	+		Rru_A2596	0.74	-0.8
3,018,493	+				-0.2
3,018,493	+				+0.0
3,018,494	-				+0.5
3,018,494	-				+0.5
3,018,494	-				-0.0
3,018,501	-				+0.3
3,018,644	+				-0.0
3,018,645	-				+0.2
3,018,699	+				+1.0
3,018,700	-				-0.1
3,019,277	-		Rru_A2597	0.74	-0.0
3,019,302	+		Rru_A2597	0.77	-0.0
3,019,302	+		Rru_A2597	0.77	-0.4
3,019,303	-		Rru_A2597	0.77	-0.0
3,019,309	+		Rru_A2597	0.78	-0.2
3,019,310	-		Rru_A2597	0.78	+0.4
3,019,369	-		Rru_A2597	0.85	+0.0
3,019,404	+		Rru_A2597	0.89	+0.8