Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2580

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,000,299	+		Rru_A2578	0.62	-0.0
3,000,315	-		Rru_A2578	0.64	+0.6
3,000,333	+		Rru_A2578	0.65	+1.1
3,000,334	-		Rru_A2578	0.65	-0.0
3,000,455	+		Rru_A2578	0.73	+0.2
3,000,455	+		Rru_A2578	0.73	+0.1
3,000,455	+		Rru_A2578	0.73	-0.0
3,000,455	+		Rru_A2578	0.73	-1.0
3,000,456	-		Rru_A2578	0.73	-0.0
3,000,456	-		Rru_A2578	0.73	+2.0
3,000,456	-		Rru_A2578	0.73	+2.6
3,000,456	-		Rru_A2578	0.73	-1.0
3,000,604	-		Rru_A2578	0.83	+0.4
3,000,683	-		Rru_A2578	0.88	+0.4
3,000,684	+		Rru_A2578	0.88	+1.2
3,000,684	+		Rru_A2578	0.88	-0.0
3,000,685	-		Rru_A2578	0.88	+1.4
3,000,685	-		Rru_A2578	0.88	+0.7
3,000,685	-		Rru_A2578	0.88	-0.0
3,000,852	+				+1.7
3,000,852	+				-0.0
3,000,852	+				-1.0
3,000,852	+				+0.5
3,002,132	+		Rru_A2580	0.69	-0.0
3,002,132	+		Rru_A2580	0.69	-0.3
3,002,132	+		Rru_A2580	0.69	-0.0
3,002,132	+		Rru_A2580	0.69	+1.1
3,002,132	+		Rru_A2580	0.69	-1.1
3,002,132	+		Rru_A2580	0.69	-1.3
3,002,133	-		Rru_A2580	0.69	-0.0
3,002,133	-		Rru_A2580	0.69	+0.6
3,002,133	-		Rru_A2580	0.69	-0.0
3,002,511	+				-1.0
3,002,512	-				+1.2
3,002,697	+				+1.0
3,002,698	-				-0.0
3,002,698	-				+0.7
3,002,698	-				+1.2
3,002,805	+		Rru_A2581	0.15	-0.0
3,002,886	+		Rru_A2581	0.19	-0.8
3,002,886	+		Rru_A2581	0.19	+0.2
3,002,887	-		Rru_A2581	0.19	+0.8
3,002,898	+		Rru_A2581	0.20	-0.0
3,002,899	-		Rru_A2581	0.20	+1.1
3,002,899	-		Rru_A2581	0.20	+0.8
3,002,899	-		Rru_A2581	0.20	-0.0
3,002,899	-		Rru_A2581	0.20	+1.1
3,003,172	+		Rru_A2581	0.33	+1.5
3,003,173	-		Rru_A2581	0.34	+1.1