Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2578

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,998,485	+		Rru_A2577	0.57	+0.3
2,998,617	+		Rru_A2577	0.64	+2.0
2,998,617	+		Rru_A2577	0.64	-0.1
2,998,617	+		Rru_A2577	0.64	+1.0
2,998,617	+		Rru_A2577	0.64	-0.0
2,998,656	+		Rru_A2577	0.65	+0.1
2,998,657	-		Rru_A2577	0.65	-0.0
2,998,657	-		Rru_A2577	0.65	-1.0
2,998,658	+		Rru_A2577	0.66	+0.3
2,998,658	+		Rru_A2577	0.66	-0.0
2,998,658	+		Rru_A2577	0.66	-0.0
2,998,659	-		Rru_A2577	0.66	-0.3
2,998,659	-		Rru_A2577	0.66	+1.3
2,998,701	+		Rru_A2577	0.68	-0.0
2,998,701	+		Rru_A2577	0.68	-0.1
2,998,702	-		Rru_A2577	0.68	-0.0
2,998,702	-		Rru_A2577	0.68	-1.3
2,998,702	-		Rru_A2577	0.68	+0.5
2,998,929	+		Rru_A2577	0.79	-0.0
2,998,930	-		Rru_A2577	0.79	-0.0
2,998,930	-		Rru_A2577	0.79	-1.6
2,998,930	-		Rru_A2577	0.79	-0.0
2,999,352	+				+1.0
2,999,352	+				-0.0
2,999,487	+				-0.0
2,999,620	+		Rru_A2578	0.18	+1.1
2,999,621	-		Rru_A2578	0.18	-0.0
2,999,686	-		Rru_A2578	0.22	-0.0
2,999,995	+		Rru_A2578	0.42	-0.0
2,999,996	-		Rru_A2578	0.42	-0.0
2,999,998	-		Rru_A2578	0.43	-0.0
2,999,998	-		Rru_A2578	0.43	-0.0
2,999,998	-		Rru_A2578	0.43	-0.0
3,000,299	+		Rru_A2578	0.62	-0.0
3,000,315	-		Rru_A2578	0.64	+0.6
3,000,333	+		Rru_A2578	0.65	+1.1
3,000,334	-		Rru_A2578	0.65	-0.0
3,000,455	+		Rru_A2578	0.73	+0.2
3,000,455	+		Rru_A2578	0.73	+0.1
3,000,455	+		Rru_A2578	0.73	-0.0
3,000,455	+		Rru_A2578	0.73	-1.0
3,000,456	-		Rru_A2578	0.73	-0.0
3,000,456	-		Rru_A2578	0.73	+2.0
3,000,456	-		Rru_A2578	0.73	+2.6
3,000,456	-		Rru_A2578	0.73	-1.0
3,000,604	-		Rru_A2578	0.83	+0.4
3,000,683	-		Rru_A2578	0.88	+0.4
3,000,684	+		Rru_A2578	0.88	+1.2
3,000,684	+		Rru_A2578	0.88	-0.0
3,000,685	-		Rru_A2578	0.88	+1.4
3,000,685	-		Rru_A2578	0.88	+0.7
3,000,685	-		Rru_A2578	0.88	-0.0
3,000,852	+				+1.7
3,000,852	+				-0.0
3,000,852	+				-1.0
3,000,852	+				+0.5