Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2538

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,951,355	+				+1.0
2,951,355	+				+0.2
2,951,355	+				+0.1
2,951,356	-				+0.4
2,951,356	-				-0.0
2,951,356	-				-0.0
2,951,401	+				+0.8
2,951,401	+				-0.0
2,951,401	+				-0.0
2,951,402	-				-0.0
2,951,402	-				+1.1
2,951,402	-				+0.9
2,951,402	-				-1.0
2,951,402	-				-0.0
2,951,402	-				+0.8
2,951,589	-		Rru_A2537	0.21	+1.4
2,951,589	-		Rru_A2537	0.21	+1.2
2,951,910	-		Rru_A2537	0.76	+0.5
2,951,910	-		Rru_A2537	0.76	+0.3
2,951,910	-		Rru_A2537	0.76	+0.2
2,951,919	+		Rru_A2537	0.78	+0.2
2,951,919	+		Rru_A2537	0.78	+0.1
2,951,919	+		Rru_A2537	0.78	+0.6
2,952,052	+				+0.1
2,952,052	+				-0.0
2,952,052	+				-0.0
2,952,052	+				-0.0
2,952,053	-				-0.0
2,952,095	-				-0.0
2,952,118	+				+0.8
2,952,118	+				-0.0
2,952,119	-				+0.4
2,952,218	+				-0.0
2,952,218	+				-0.0
2,952,218	+				-0.0
2,952,218	+				-0.1
2,952,218	+				-0.0
2,952,219	-				-0.0
2,952,219	-				-0.0
2,952,219	-				-1.0
2,952,220	+				-0.0
2,952,220	+				+0.5
2,952,221	-				-0.3
2,952,221	-				+0.5
2,952,253	+				-1.6
2,952,253	+				-0.0
2,952,254	-				+0.2
2,952,254	-				-0.0
2,952,254	-				-0.0
2,952,257	+				+0.3
2,952,257	+				-0.1
2,952,257	+				-1.0
2,952,257	+				+0.4
2,952,340	+		Rru_A2538	0.24	+0.0
2,952,341	-		Rru_A2538	0.24	-0.8
2,952,341	-		Rru_A2538	0.24	+0.3
2,952,716	+				-1.9
2,952,748	+				-0.8
2,952,749	-				-0.0
2,952,832	-				-0.0
2,953,200	+		Rru_A2539	0.75	-1.2
2,953,201	-		Rru_A2539	0.75	-0.0
2,953,223	+		Rru_A2539	0.80	-0.0
2,953,223	+		Rru_A2539	0.80	-0.0
2,953,223	+		Rru_A2539	0.80	+0.6
2,953,224	-		Rru_A2539	0.80	+0.2
2,953,435	+				+0.2
2,953,435	+				-0.6
2,953,451	+				-0.0
2,953,451	+				-0.0
2,953,451	+				-0.3
2,953,451	+				-0.6
2,953,451	+				-0.2
2,953,452	-				-0.0
2,953,452	-				+1.2
2,953,452	-				+0.6
2,953,452	-				+0.9
2,953,532	+		Rru_A2540	0.12	-0.0
2,953,533	-		Rru_A2540	0.12	-0.0
2,953,533	-		Rru_A2540	0.12	-0.0
2,953,533	-		Rru_A2540	0.12	-0.0
2,953,664	+		Rru_A2540	0.23	-0.2
2,953,664	+		Rru_A2540	0.23	-0.0
2,953,664	+		Rru_A2540	0.23	+1.0
2,953,664	+		Rru_A2540	0.23	+0.7
2,953,665	-		Rru_A2540	0.23	-0.2
2,953,715	+		Rru_A2540	0.28	-0.0
2,953,715	+		Rru_A2540	0.28	-0.0
2,953,716	-		Rru_A2540	0.28	-0.0