Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2528

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,941,617	+				+0.8
2,941,839	+		Rru_A2527	0.31	-0.0
2,941,839	+		Rru_A2527	0.31	-0.0
2,941,840	-		Rru_A2527	0.31	-0.0
2,942,133	+		Rru_A2527	0.61	-1.0
2,942,134	-		Rru_A2527	0.61	-0.0
2,942,134	-		Rru_A2527	0.61	-0.0
2,942,268	+		Rru_A2527	0.75	-0.0
2,942,378	+		Rru_A2527	0.87	-1.6
2,942,378	+		Rru_A2527	0.87	+0.2
2,942,378	+		Rru_A2527	0.87	-0.0
2,942,378	+		Rru_A2527	0.87	+1.0
2,942,378	+		Rru_A2527	0.87	+0.9
2,942,379	-		Rru_A2527	0.87	-0.0
2,942,379	-		Rru_A2527	0.87	+0.9
2,942,379	-		Rru_A2527	0.87	+0.1
2,942,379	-		Rru_A2527	0.87	-0.0
2,942,379	-		Rru_A2527	0.87	-0.0
2,942,504	+				+0.2
2,942,505	-				-0.0
2,942,505	-				-0.0
2,942,568	+				-0.2
2,942,569	-				-0.0
2,942,569	-				+1.1
2,942,569	-				+0.7
2,942,569	-				+0.1
2,942,851	+		Rru_A2528	0.33	+0.4
2,942,861	-		Rru_A2528	0.34	-0.0
2,942,865	+		Rru_A2528	0.34	-0.2
2,942,865	+		Rru_A2528	0.34	-0.6
2,942,865	+		Rru_A2528	0.34	-0.0
2,942,865	+		Rru_A2528	0.34	+0.9
2,942,866	-		Rru_A2528	0.35	-0.0
2,942,866	-		Rru_A2528	0.35	+0.6
2,942,866	-		Rru_A2528	0.35	-0.0
2,942,881	+		Rru_A2528	0.36	-0.4
2,942,882	-		Rru_A2528	0.36	-1.0
2,942,882	-		Rru_A2528	0.36	-0.0
2,942,953	+		Rru_A2528	0.44	+0.2
2,942,953	+		Rru_A2528	0.44	-0.7
2,942,954	-		Rru_A2528	0.44	+0.7
2,942,971	+		Rru_A2528	0.46	-0.5
2,942,971	+		Rru_A2528	0.46	+1.3
2,942,972	-		Rru_A2528	0.46	-0.0
2,942,972	-		Rru_A2528	0.46	+0.1
2,942,973	+		Rru_A2528	0.47	+0.8
2,942,973	+		Rru_A2528	0.47	-0.0
2,942,976	+		Rru_A2528	0.47	-0.5
2,942,976	+		Rru_A2528	0.47	-0.0
2,942,976	+		Rru_A2528	0.47	+0.6
2,942,976	+		Rru_A2528	0.47	-0.4
2,942,976	+		Rru_A2528	0.47	-0.1
2,942,977	-		Rru_A2528	0.47	-0.4
2,942,977	-		Rru_A2528	0.47	-0.0
2,942,977	-		Rru_A2528	0.47	-0.0
2,943,007	-		Rru_A2528	0.50	-0.9
2,943,057	+		Rru_A2528	0.56	-0.0
2,943,057	+		Rru_A2528	0.56	-0.3
2,943,057	+		Rru_A2528	0.56	+0.5
2,943,057	+		Rru_A2528	0.56	-0.0
2,943,057	+		Rru_A2528	0.56	-0.0
2,943,057	+		Rru_A2528	0.56	-0.0
2,943,057	+		Rru_A2528	0.56	-0.0
2,943,057	+		Rru_A2528	0.56	-0.3
2,943,058	-		Rru_A2528	0.56	-0.1
2,943,058	-		Rru_A2528	0.56	-0.8
2,943,058	-		Rru_A2528	0.56	-0.0
2,943,079	+		Rru_A2528	0.58	-0.0
2,943,079	+		Rru_A2528	0.58	-0.8
2,943,079	+		Rru_A2528	0.58	-0.1
2,943,079	+		Rru_A2528	0.58	+0.1
2,943,080	-		Rru_A2528	0.59	+0.2
2,943,080	-		Rru_A2528	0.59	+0.1
2,943,080	-		Rru_A2528	0.59	-0.0
2,943,080	-		Rru_A2528	0.59	-0.0
2,943,080	-		Rru_A2528	0.59	-0.0
2,943,080	-		Rru_A2528	0.59	-0.9
2,943,315	-		Rru_A2528	0.85	-1.0
2,943,379	+				-0.2
2,943,379	+				-0.0
2,943,380	-				-0.0
2,943,380	-				-0.0
2,943,380	-				-0.0
2,943,381	+				+0.2
2,943,381	+				-1.6
2,943,382	-				-0.0
2,943,462	+				+0.2
2,943,463	-				-0.6
2,943,463	-				+0.4
2,943,479	+				-0.0
2,943,484	+				+1.2
2,943,484	+				+0.6
2,943,484	+				+0.6
2,943,485	-				+0.3
2,943,485	-				-0.0
2,943,585	+				+0.3
2,943,585	+				-0.0
2,943,585	+				-0.2
2,943,585	+				-0.0
2,943,586	-				-0.0
2,943,586	-				-0.1
2,943,631	+		Rru_A2529	0.13	-0.0
2,943,703	+		Rru_A2529	0.18	+0.0
2,943,703	+		Rru_A2529	0.18	-0.3
2,943,703	+		Rru_A2529	0.18	-0.0
2,943,703	+		Rru_A2529	0.18	+0.2
2,943,727	+		Rru_A2529	0.20	-2.0
2,943,727	+		Rru_A2529	0.20	-1.0
2,943,886	+		Rru_A2529	0.31	-0.8
2,943,886	+		Rru_A2529	0.31	-0.0
2,943,890	+		Rru_A2529	0.32	-0.0
2,943,890	+		Rru_A2529	0.32	-1.0
2,943,890	+		Rru_A2529	0.32	+0.0
2,943,890	+		Rru_A2529	0.32	+1.4
2,943,890	+		Rru_A2529	0.32	-0.0
2,943,890	+		Rru_A2529	0.32	-0.9
2,943,890	+		Rru_A2529	0.32	+0.1
2,943,890	+		Rru_A2529	0.32	-0.0
2,943,890	+		Rru_A2529	0.32	+1.6
2,943,890	+		Rru_A2529	0.32	+0.2
2,943,891	-		Rru_A2529	0.32	-0.0
2,943,891	-		Rru_A2529	0.32	+0.9
2,943,891	-		Rru_A2529	0.32	-0.1
2,943,891	-		Rru_A2529	0.32	-0.0
2,943,891	-		Rru_A2529	0.32	-1.0
2,943,891	-		Rru_A2529	0.32	+0.1
2,943,891	-		Rru_A2529	0.32	-0.0
2,943,891	-		Rru_A2529	0.32	-0.0
2,943,953	-		Rru_A2529	0.36	+0.6
2,944,018	+		Rru_A2529	0.41	+0.8
2,944,018	+		Rru_A2529	0.41	-1.0
2,944,018	+		Rru_A2529	0.41	-0.6
2,944,018	+		Rru_A2529	0.41	-0.0
2,944,019	-		Rru_A2529	0.41	-0.0
2,944,019	-		Rru_A2529	0.41	-1.0
2,944,019	-		Rru_A2529	0.41	-0.0
2,944,019	-		Rru_A2529	0.41	+1.0
2,944,075	+		Rru_A2529	0.45	-0.3
2,944,076	-		Rru_A2529	0.45	-0.0
2,944,105	+		Rru_A2529	0.47	+0.4
2,944,105	+		Rru_A2529	0.47	-0.1
2,944,105	+		Rru_A2529	0.47	-0.0
2,944,105	+		Rru_A2529	0.47	+0.3
2,944,105	+		Rru_A2529	0.47	-0.1
2,944,105	+		Rru_A2529	0.47	+0.7
2,944,106	-		Rru_A2529	0.47	-0.0
2,944,176	+		Rru_A2529	0.53	-1.0
2,944,176	+		Rru_A2529	0.53	-0.0
2,944,176	+		Rru_A2529	0.53	-0.3
2,944,177	-		Rru_A2529	0.53	-0.1
2,944,177	-		Rru_A2529	0.53	+0.0
2,944,177	-		Rru_A2529	0.53	+1.0
2,944,177	-		Rru_A2529	0.53	-0.0
2,944,179	+		Rru_A2529	0.53	-1.2
2,944,179	+		Rru_A2529	0.53	+1.0
2,944,180	-		Rru_A2529	0.53	-1.0
2,944,180	-		Rru_A2529	0.53	-1.0
2,944,186	+		Rru_A2529	0.53	+0.4
2,944,388	-		Rru_A2529	0.68	-0.0
2,944,388	-		Rru_A2529	0.68	-0.5