Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2525

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,938,688	-				-0.0
2,938,688	-				-1.0
2,938,690	+				-2.1
2,938,691	-				-2.0
2,938,691	-				-0.0
2,938,981	+		Rru_A2524	0.36	-0.0
2,938,981	+		Rru_A2524	0.36	+0.1
2,938,981	+		Rru_A2524	0.36	-0.8
2,938,982	-		Rru_A2524	0.36	-0.0
2,938,982	-		Rru_A2524	0.36	-3.1
2,938,982	-		Rru_A2524	0.36	-1.7
2,938,982	-		Rru_A2524	0.36	-0.0
2,939,008	+		Rru_A2524	0.39	-1.7
2,939,039	+		Rru_A2524	0.42	-1.6
2,939,040	-		Rru_A2524	0.43	-2.6
2,939,195	+		Rru_A2524	0.60	-2.3
2,939,196	-		Rru_A2524	0.60	-0.6
2,939,197	+		Rru_A2524	0.60	-0.0
2,939,198	-		Rru_A2524	0.60	-0.0
2,939,198	-		Rru_A2524	0.60	-0.0
2,939,198	-		Rru_A2524	0.60	-2.3
2,939,198	-		Rru_A2524	0.60	-1.8
2,939,198	-		Rru_A2524	0.60	-3.3
2,939,198	-		Rru_A2524	0.60	-1.6
2,939,198	-		Rru_A2524	0.60	-0.0
2,939,198	-		Rru_A2524	0.60	-1.8
2,939,350	+		Rru_A2524	0.77	-1.0
2,939,351	-		Rru_A2524	0.77	-2.5
2,939,448	-		Rru_A2524	0.88	-0.0
2,939,449	+		Rru_A2524	0.88	-2.4
2,939,449	+		Rru_A2524	0.88	-3.1
2,939,449	+		Rru_A2524	0.88	-1.0
2,939,449	+		Rru_A2524	0.88	-0.0
2,939,449	+		Rru_A2524	0.88	-1.8
2,939,450	-		Rru_A2524	0.88	-0.4
2,939,450	-		Rru_A2524	0.88	-2.0
2,939,450	-		Rru_A2524	0.88	-0.0
2,939,450	-		Rru_A2524	0.88	-1.6
2,939,488	+				-2.0
2,939,488	+				-2.5
2,939,489	-				-2.9
2,939,489	-				-1.8
2,939,489	-				-0.0
2,939,489	-				-1.6
2,939,489	-				-2.3
2,939,489	-				-3.2
2,939,489	-				-2.7
2,939,519	+				-0.0
2,939,519	+				-1.6
2,939,519	+				-0.0
2,939,520	-				-2.6
2,939,521	+				-2.8
2,939,521	+				-0.0
2,939,522	-				-0.0
2,939,574	+				-1.1
2,939,574	+				-1.9
2,939,698	-		Rru_A2525	0.12	-3.0
2,939,698	-		Rru_A2525	0.12	-1.6
2,939,698	-		Rru_A2525	0.12	-1.7
2,939,698	-		Rru_A2525	0.12	-0.0
2,939,698	-		Rru_A2525	0.12	-2.0
2,939,934	+		Rru_A2525	0.36	-1.8
2,939,935	-		Rru_A2525	0.36	-3.0
2,939,994	+		Rru_A2525	0.42	+0.4
2,939,994	+		Rru_A2525	0.42	-1.2
2,939,995	-		Rru_A2525	0.42	-0.0
2,939,995	-		Rru_A2525	0.42	-0.0
2,939,995	-		Rru_A2525	0.42	+0.1
2,940,234	+		Rru_A2525	0.66	-1.0
2,940,298	+		Rru_A2525	0.72	-2.9
2,940,336	+		Rru_A2525	0.76	-3.4
2,940,336	+		Rru_A2525	0.76	-0.0
2,940,337	-		Rru_A2525	0.76	-2.2
2,940,337	-		Rru_A2525	0.76	-2.1
2,940,419	-		Rru_A2525	0.84	-0.0
2,940,465	+		Rru_A2525	0.89	-0.0
2,940,465	+		Rru_A2525	0.89	-0.0
2,940,466	-		Rru_A2525	0.89	-1.6
2,941,206	+				-0.0
2,941,206	+				-0.0
2,941,292	-				-0.4
2,941,326	+				-2.0
2,941,537	+				-0.4
2,941,537	+				+1.0
2,941,537	+				-0.0
2,941,537	+				+1.0
2,941,537	+				+2.2
2,941,538	-				-0.0
2,941,538	-				-0.0
2,941,538	-				+1.2
2,941,538	-				-0.0
2,941,538	-				-0.0
2,941,540	+				-1.0
2,941,540	+				-0.1
2,941,541	-				-0.0
2,941,541	-				-0.0
2,941,541	-				-0.0
2,941,541	-				-0.0
2,941,541	-				-0.0
2,941,541	-				-0.0