Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2520

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,929,312	+		Rru_A2518	0.86	-1.6
2,929,438	-				+1.1
2,929,438	-				+0.9
2,929,438	-				+0.4
2,929,438	-				+0.6
2,929,478	-		Rru_A2519	0.28	+0.4
2,929,478	-		Rru_A2519	0.28	-0.8
2,929,479	+		Rru_A2519	0.29	-0.0
2,929,479	+		Rru_A2519	0.29	+1.8
2,929,480	-		Rru_A2519	0.30	+0.7
2,929,480	-		Rru_A2519	0.30	-0.0
2,929,480	-		Rru_A2519	0.30	-0.0
2,929,480	-		Rru_A2519	0.30	-0.0
2,929,656	+				-0.0
2,929,679	+				-0.0
2,929,679	+				+0.9
2,929,680	-				+0.9
2,929,925	+				+0.1
2,929,925	+				+0.3
2,929,925	+				+1.3
2,929,925	+				-0.0
2,929,926	-				+1.2
2,929,926	-				+0.8
2,929,926	-				+0.7
2,930,318	+		Rru_A2520	0.25	+0.1
2,930,333	+		Rru_A2520	0.26	-0.7
2,930,334	-		Rru_A2520	0.26	+0.4
2,930,351	+		Rru_A2520	0.27	-0.0
2,930,352	-		Rru_A2520	0.27	+0.3
2,930,352	-		Rru_A2520	0.27	-0.0
2,930,378	+		Rru_A2520	0.28	-1.6
2,930,379	-		Rru_A2520	0.28	-0.0
2,930,837	+		Rru_A2520	0.48	-2.3
2,930,909	+		Rru_A2520	0.51	-0.1
2,930,909	+		Rru_A2520	0.51	+0.2
2,930,909	+		Rru_A2520	0.51	-0.0
2,930,909	+		Rru_A2520	0.51	+0.3
2,930,910	-		Rru_A2520	0.51	+0.2
2,930,910	-		Rru_A2520	0.51	+0.4
2,930,910	-		Rru_A2520	0.51	+0.5
2,930,914	+		Rru_A2520	0.52	-0.0
2,930,915	-		Rru_A2520	0.52	-0.0
2,930,996	+		Rru_A2520	0.55	-0.0
2,930,996	+		Rru_A2520	0.55	-1.0
2,930,996	+		Rru_A2520	0.55	-0.2
2,930,997	-		Rru_A2520	0.55	+0.9
2,930,997	-		Rru_A2520	0.55	-1.1
2,931,053	+		Rru_A2520	0.58	+0.5
2,931,053	+		Rru_A2520	0.58	-0.0
2,931,054	-		Rru_A2520	0.58	-0.0
2,931,054	-		Rru_A2520	0.58	+0.3
2,931,404	+		Rru_A2520	0.73	+1.1
2,931,404	+		Rru_A2520	0.73	+0.8
2,931,405	-		Rru_A2520	0.73	+0.1
2,931,802	+				+1.0
2,931,812	+				-0.0
2,931,812	+				-0.0
2,931,813	-				+0.3
2,931,814	+				-0.0
2,932,107	-				+0.2
2,932,107	-				-1.6
2,932,158	-				+0.5
2,932,233	+				+0.4
2,932,287	+				-0.0
2,932,353	-				+0.3
2,932,353	-				-0.0
2,932,353	-				-0.0
2,932,410	+				+0.5
2,932,411	-				+0.3
2,932,712	+				-0.5
2,932,713	-				+0.6
2,932,739	+				-0.0
2,932,740	-				-0.9
2,932,770	+				+0.6
2,932,770	+				-0.6
2,932,771	-				-0.0
2,932,771	-				+0.8
2,932,771	-				+0.7
2,932,836	+		Rru_A2521	0.10	-0.0
2,932,837	-		Rru_A2521	0.11	-1.0
2,932,837	-		Rru_A2521	0.11	-0.0
2,932,837	-		Rru_A2521	0.11	-0.0
2,932,849	-		Rru_A2521	0.11	+1.0
2,932,867	+		Rru_A2521	0.11	+0.3
2,932,868	-		Rru_A2521	0.11	+1.3
2,932,868	-		Rru_A2521	0.11	-0.0