Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2502

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,908,089	+				+0.6
2,908,089	+				+1.4
2,908,089	+				-0.8
2,908,090	-				+0.4
2,908,090	-				+0.6
2,908,090	-				+0.2
2,908,095	+				-0.0
2,908,095	+				-0.0
2,908,095	+				+0.1
2,908,096	-				-0.0
2,908,096	-				-1.0
2,908,150	+				-0.0
2,908,150	+				-1.0
2,908,426	-		Rru_A2501	0.55	+0.7
2,908,546	+		Rru_A2501	0.78	-0.0
2,908,547	-		Rru_A2501	0.78	+0.2
2,908,748	+				-0.0
2,908,748	+				+1.0
2,908,748	+				-0.0
2,908,749	-				+0.7
2,908,749	-				-0.0
2,908,749	-				+1.0
2,908,749	-				+0.7
2,908,752	+				-0.0
2,908,753	-				+1.5
2,908,930	+		Rru_A2502	0.27	+0.1
2,908,931	-		Rru_A2502	0.27	-0.0
2,908,931	-		Rru_A2502	0.27	+1.0
2,909,097	+		Rru_A2502	0.63	-0.5
2,909,098	-		Rru_A2502	0.63	-0.0
2,909,098	-		Rru_A2502	0.63	+0.7
2,909,319	+				-0.0
2,909,320	-				+2.0
2,909,320	-				-0.0
2,909,320	-				+0.6
2,909,373	+		Rru_A2503	0.16	-0.0
2,909,373	+		Rru_A2503	0.16	-0.0
2,909,373	+		Rru_A2503	0.16	-0.0
2,909,373	+		Rru_A2503	0.16	-0.0
2,909,373	+		Rru_A2503	0.16	+0.2
2,909,374	-		Rru_A2503	0.16	+0.6
2,909,505	+		Rru_A2503	0.33	+0.7
2,909,505	+		Rru_A2503	0.33	-0.0
2,909,506	-		Rru_A2503	0.33	-1.0
2,909,506	-		Rru_A2503	0.33	-0.0
2,909,514	+		Rru_A2503	0.34	-0.0
2,909,515	-		Rru_A2503	0.34	+0.8
2,909,586	+		Rru_A2503	0.43	-0.0
2,909,606	-		Rru_A2503	0.45	-1.0
2,909,661	+		Rru_A2503	0.52	-0.0
2,909,661	+		Rru_A2503	0.52	+1.1
2,909,662	-		Rru_A2503	0.52	+0.3
2,909,662	-		Rru_A2503	0.52	+0.1
2,909,679	+		Rru_A2503	0.54	-0.0
2,909,680	-		Rru_A2503	0.55	+1.5
2,909,680	-		Rru_A2503	0.55	-0.0
2,909,763	+		Rru_A2503	0.65	-0.0
2,909,764	-		Rru_A2503	0.65	+1.0
2,909,764	-		Rru_A2503	0.65	-0.0
2,909,926	+		Rru_A2503	0.86	+0.7
2,909,926	+		Rru_A2503	0.86	+1.3
2,909,927	-		Rru_A2503	0.86	-1.0
2,909,927	-		Rru_A2503	0.86	-1.6
2,909,927	-		Rru_A2503	0.86	+1.0
2,910,078	+				-0.0
2,910,101	+				+0.9
2,910,101	+				-0.0
2,910,103	+				-0.0
2,910,103	+				-1.6
2,910,103	+				-0.0
2,910,103	+				-0.0
2,910,148	+				+0.6