Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2479

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,878,834	+		Rru_A2478	0.17	-1.0
2,878,834	+		Rru_A2478	0.17	-1.1
2,878,834	+		Rru_A2478	0.17	-1.0
2,878,992	+		Rru_A2478	0.33	-1.9
2,878,993	-		Rru_A2478	0.33	-0.0
2,879,009	+		Rru_A2478	0.35	-0.2
2,879,074	-		Rru_A2478	0.41	-0.0
2,879,100	+		Rru_A2478	0.44	+0.2
2,879,100	+		Rru_A2478	0.44	-1.0
2,879,100	+		Rru_A2478	0.44	-0.3
2,879,100	+		Rru_A2478	0.44	-0.6
2,879,448	+		Rru_A2478	0.79	-0.0
2,879,530	+		Rru_A2478	0.87	-1.0
2,879,530	+		Rru_A2478	0.87	-0.0
2,879,531	-		Rru_A2478	0.87	-0.0
2,879,630	+				-0.8
2,879,630	+				-0.0
2,879,631	-				-1.0
2,879,631	-				-0.0
2,879,754	+				-0.0
2,879,755	-				+1.5
2,879,756	+				-0.0
2,879,756	+				-0.0
2,879,756	+				-0.0
2,879,757	-				-0.0
2,879,761	+				+0.7
2,879,848	-				-0.0
2,879,850	-				-1.2
2,880,233	+		Rru_A2479	0.23	-1.5
2,880,233	+		Rru_A2479	0.23	-2.3
2,880,234	-		Rru_A2479	0.23	+0.3
2,880,518	+		Rru_A2479	0.36	-1.8
2,880,518	+		Rru_A2479	0.36	-0.0
2,880,523	-		Rru_A2479	0.36	-0.0
2,880,659	+		Rru_A2479	0.42	-0.0
2,880,703	-		Rru_A2479	0.44	-1.8
2,880,704	+		Rru_A2479	0.44	+0.2
2,880,704	+		Rru_A2479	0.44	-1.0
2,880,705	-		Rru_A2479	0.44	-0.0
2,880,705	-		Rru_A2479	0.44	-1.0
2,880,707	+		Rru_A2479	0.44	-1.4
2,880,708	-		Rru_A2479	0.44	-0.0
2,880,708	-		Rru_A2479	0.44	+1.0
2,880,708	-		Rru_A2479	0.44	-1.0
2,880,708	-		Rru_A2479	0.44	-0.0
2,880,708	-		Rru_A2479	0.44	-1.4
2,881,131	-		Rru_A2479	0.63	-0.5
2,881,152	+		Rru_A2479	0.64	-1.0
2,881,155	-		Rru_A2479	0.64	-0.0
2,881,155	-		Rru_A2479	0.64	-0.0
2,881,246	-		Rru_A2479	0.69	-1.4
2,881,248	-		Rru_A2479	0.69	-0.0
2,881,292	+		Rru_A2479	0.71	-0.0
2,881,296	+		Rru_A2479	0.71	-2.1
2,881,297	-		Rru_A2479	0.71	-0.0
2,881,297	-		Rru_A2479	0.71	-1.4
2,881,298	+		Rru_A2479	0.71	-0.0
2,881,298	+		Rru_A2479	0.71	-1.3
2,881,299	-		Rru_A2479	0.71	-1.6
2,881,691	+		Rru_A2479	0.89	-0.0
2,881,691	+		Rru_A2479	0.89	-0.0
2,881,778	+				-1.6
2,882,017	+				-2.3
2,882,018	-				-0.4
2,882,077	+				-2.0
2,882,118	-				-0.7
2,882,137	+				-0.0
2,882,138	-				-0.0
2,882,397	+		Rru_A2480	0.22	-2.0
2,882,398	-		Rru_A2480	0.22	-0.0
2,882,398	-		Rru_A2480	0.22	-0.0