Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2478

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,877,711	+		Rru_A2477	0.20	+0.3
2,877,712	-		Rru_A2477	0.20	+1.6
2,877,742	-		Rru_A2477	0.23	-0.0
2,877,813	-		Rru_A2477	0.30	+0.9
2,877,813	-		Rru_A2477	0.30	-0.0
2,877,822	+		Rru_A2477	0.31	-0.0
2,877,822	+		Rru_A2477	0.31	-0.0
2,877,823	-		Rru_A2477	0.31	+0.6
2,877,823	-		Rru_A2477	0.31	-0.0
2,877,891	+		Rru_A2477	0.37	-0.0
2,877,892	-		Rru_A2477	0.37	-0.7
2,877,892	-		Rru_A2477	0.37	+0.5
2,878,062	+		Rru_A2477	0.54	+0.5
2,878,063	-		Rru_A2477	0.54	+1.2
2,878,101	+		Rru_A2477	0.58	+0.6
2,878,102	-		Rru_A2477	0.58	+0.7
2,878,158	+		Rru_A2477	0.63	+0.3
2,878,158	+		Rru_A2477	0.63	+0.4
2,878,159	-		Rru_A2477	0.63	-0.0
2,878,159	-		Rru_A2477	0.63	-0.0
2,878,161	+		Rru_A2477	0.63	-0.0
2,878,161	+		Rru_A2477	0.63	+0.8
2,878,161	+		Rru_A2477	0.63	-0.0
2,878,161	+		Rru_A2477	0.63	-0.0
2,878,162	-		Rru_A2477	0.63	+0.4
2,878,162	-		Rru_A2477	0.63	+0.1
2,878,177	-		Rru_A2477	0.65	-0.0
2,878,293	+		Rru_A2477	0.76	-0.0
2,878,293	+		Rru_A2477	0.76	-0.0
2,878,400	+		Rru_A2477	0.87	+2.0
2,878,536	+				+1.2
2,878,555	+				-1.0
2,878,555	+				+1.0
2,878,556	-				+0.6
2,878,559	+				+1.3
2,878,589	-				+1.4
2,878,597	-				+1.8
2,878,657	+				+0.1
2,878,657	+				-0.1
2,878,834	+		Rru_A2478	0.17	-1.0
2,878,834	+		Rru_A2478	0.17	-1.1
2,878,834	+		Rru_A2478	0.17	-1.0
2,878,992	+		Rru_A2478	0.33	-1.9
2,878,993	-		Rru_A2478	0.33	-0.0
2,879,009	+		Rru_A2478	0.35	-0.2
2,879,074	-		Rru_A2478	0.41	-0.0
2,879,100	+		Rru_A2478	0.44	+0.2
2,879,100	+		Rru_A2478	0.44	-1.0
2,879,100	+		Rru_A2478	0.44	-0.3
2,879,100	+		Rru_A2478	0.44	-0.6
2,879,448	+		Rru_A2478	0.79	-0.0
2,879,530	+		Rru_A2478	0.87	-1.0
2,879,530	+		Rru_A2478	0.87	-0.0
2,879,531	-		Rru_A2478	0.87	-0.0
2,879,630	+				-0.8
2,879,630	+				-0.0
2,879,631	-				-1.0
2,879,631	-				-0.0
2,879,754	+				-0.0
2,879,755	-				+1.5
2,879,756	+				-0.0
2,879,756	+				-0.0
2,879,756	+				-0.0
2,879,757	-				-0.0
2,879,761	+				+0.7
2,879,848	-				-0.0
2,879,850	-				-1.2
2,880,233	+		Rru_A2479	0.23	-1.5
2,880,233	+		Rru_A2479	0.23	-2.3
2,880,234	-		Rru_A2479	0.23	+0.3
2,880,518	+		Rru_A2479	0.36	-1.8
2,880,518	+		Rru_A2479	0.36	-0.0
2,880,523	-		Rru_A2479	0.36	-0.0
2,880,659	+		Rru_A2479	0.42	-0.0