Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2460

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,857,753	+		Rru_A2459	0.28	-0.1
2,857,937	+		Rru_A2459	0.58	-0.0
2,857,949	+		Rru_A2459	0.60	+0.4
2,857,949	+		Rru_A2459	0.60	+1.0
2,857,950	-		Rru_A2459	0.60	+0.6
2,857,994	-		Rru_A2459	0.67	+0.4
2,858,081	+		Rru_A2459	0.82	-0.0
2,858,081	+		Rru_A2459	0.82	+1.1
2,858,081	+		Rru_A2459	0.82	+0.7
2,858,373	+				+0.6
2,858,374	-				+0.1
2,858,374	-				+0.5
2,858,421	-				+1.6
2,858,459	-				+0.0
2,858,677	+				-1.6
2,858,784	+				+0.2
2,858,784	+				+0.2
2,858,784	+				-1.3
2,858,784	+				-0.0
2,858,784	+				+1.0
2,858,784	+				+0.7
2,858,785	-				-0.0
2,858,785	-				+0.1
2,858,785	-				+0.7
2,858,785	-				-1.6
2,858,793	+				-0.0
2,858,793	+				+1.0
2,858,794	-				-0.0
2,858,949	+		Rru_A2460	0.15	-0.0
2,858,949	+		Rru_A2460	0.15	+0.2
2,858,950	-		Rru_A2460	0.15	-0.0
2,858,950	-		Rru_A2460	0.15	+0.6
2,858,950	-		Rru_A2460	0.15	+0.5
2,858,964	+		Rru_A2460	0.16	-0.2
2,859,073	-		Rru_A2460	0.22	-0.1
2,859,161	+		Rru_A2460	0.28	+1.1
2,859,161	+		Rru_A2460	0.28	+0.2
2,859,161	+		Rru_A2460	0.28	+0.5
2,859,162	-		Rru_A2460	0.28	+0.0
2,859,201	+		Rru_A2460	0.30	+1.5
2,859,201	+		Rru_A2460	0.30	+1.1
2,859,201	+		Rru_A2460	0.30	+0.8
2,859,201	+		Rru_A2460	0.30	-1.6
2,859,201	+		Rru_A2460	0.30	-0.0
2,859,202	-		Rru_A2460	0.30	-0.1
2,859,202	-		Rru_A2460	0.30	+0.7
2,859,202	-		Rru_A2460	0.30	-1.0
2,859,202	-		Rru_A2460	0.30	-0.0
2,859,202	-		Rru_A2460	0.30	-0.0
2,860,046	+		Rru_A2460	0.80	+0.6
2,860,046	+		Rru_A2460	0.80	-0.0
2,860,047	-		Rru_A2460	0.80	-0.0
2,860,205	+		Rru_A2460	0.89	+0.9
2,860,206	-		Rru_A2460	0.89	+0.6
2,860,206	-		Rru_A2460	0.89	+0.3
2,860,371	+				+0.1
2,860,371	+				-0.0
2,860,372	-				-0.0
2,860,574	+				+0.1
2,860,575	-				-0.0
2,861,137	+				-2.6
2,861,138	-				-0.0
2,861,138	-				-0.0
2,861,189	-				-0.0
2,861,248	-				+0.4
2,861,383	+		Rru_A2462	0.11	-0.4
2,861,384	-		Rru_A2462	0.12	-0.0
2,861,384	-		Rru_A2462	0.12	-0.3