Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2421

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,819,412	+				+0.0
2,819,419	+				+0.5
2,819,420	-				+1.2
2,819,420	-				+0.5
2,819,576	+				+1.1
2,819,589	+				+0.7
2,819,590	-				+0.1
2,819,591	+				+0.7
2,819,591	+				+0.5
2,819,591	+				+0.3
2,819,591	+				-0.0
2,819,591	+				+0.5
2,819,591	+				+1.2
2,819,591	+				-0.0
2,819,592	-				+0.7
2,819,592	-				+1.0
2,819,631	+				-0.0
2,819,704	+				-0.6
2,819,705	-				+0.2
2,819,948	+		Rru_A2420	0.49	-0.0
2,819,948	+		Rru_A2420	0.49	+1.1
2,819,948	+		Rru_A2420	0.49	+0.2
2,819,949	-		Rru_A2420	0.49	-1.0
2,820,286	+				+0.3
2,820,286	+				-0.0
2,820,286	+				+0.9
2,820,286	+				+0.6
2,820,287	-				-1.0
2,820,287	-				-0.0
2,820,356	+				-2.2
2,820,357	-				-1.2
2,820,396	-				-1.0
2,820,485	+		Rru_A2421	0.18	-3.7
2,820,535	+		Rru_A2421	0.23	-0.0
2,820,536	-		Rru_A2421	0.23	-1.0
2,820,596	-		Rru_A2421	0.29	-2.4
2,820,596	-		Rru_A2421	0.29	-0.0
2,820,596	-		Rru_A2421	0.29	-3.2
2,820,606	+		Rru_A2421	0.29	-4.0
2,820,606	+		Rru_A2421	0.29	-0.0
2,820,606	+		Rru_A2421	0.29	-1.0
2,820,607	-		Rru_A2421	0.30	-1.6
2,820,607	-		Rru_A2421	0.30	-0.0
2,820,607	-		Rru_A2421	0.30	-3.0
2,820,607	-		Rru_A2421	0.30	-0.0
2,820,994	+		Rru_A2421	0.66	-2.5
2,820,995	-		Rru_A2421	0.66	-0.0
2,821,007	-		Rru_A2421	0.67	-2.4
2,821,007	-		Rru_A2421	0.67	-1.0
2,821,007	-		Rru_A2421	0.67	-0.0
2,821,007	-		Rru_A2421	0.67	-0.0
2,821,307	+				-0.0
2,821,308	-				-3.4
2,821,308	-				-1.4
2,821,367	+				-0.0
2,821,367	+				-2.6
2,821,367	+				-0.2
2,821,367	+				-3.5
2,821,368	-				-0.2
2,821,368	-				-0.0
2,821,368	-				-0.0
2,821,368	-				-1.6
2,821,368	-				-0.8
2,821,440	+				+0.1
2,821,440	+				-1.0
2,821,440	+				+0.3
2,821,782	+		Rru_A2422	0.21	+0.1
2,821,782	+		Rru_A2422	0.21	-0.0
2,821,783	-		Rru_A2422	0.21	-0.0
2,822,008	+		Rru_A2422	0.41	-0.0
2,822,008	+		Rru_A2422	0.41	-0.0
2,822,009	-		Rru_A2422	0.41	+0.8
2,822,009	-		Rru_A2422	0.41	+0.6
2,822,010	+		Rru_A2422	0.41	-0.0
2,822,011	-		Rru_A2422	0.41	+0.6
2,822,071	+		Rru_A2422	0.46	-0.0
2,822,071	+		Rru_A2422	0.46	+1.1
2,822,071	+		Rru_A2422	0.46	-0.0
2,822,072	-		Rru_A2422	0.46	+0.7
2,822,072	-		Rru_A2422	0.46	+0.9
2,822,072	-		Rru_A2422	0.46	+0.7
2,822,072	-		Rru_A2422	0.46	+0.7
2,822,074	+		Rru_A2422	0.47	-0.0
2,822,074	+		Rru_A2422	0.47	+0.4
2,822,074	+		Rru_A2422	0.47	+0.2
2,822,074	+		Rru_A2422	0.47	-2.0
2,822,074	+		Rru_A2422	0.47	-0.0
2,822,074	+		Rru_A2422	0.47	+0.7
2,822,074	+		Rru_A2422	0.47	+0.6
2,822,074	+		Rru_A2422	0.47	-0.0
2,822,075	-		Rru_A2422	0.47	+0.7
2,822,075	-		Rru_A2422	0.47	+0.4
2,822,075	-		Rru_A2422	0.47	+0.3
2,822,075	-		Rru_A2422	0.47	+1.0
2,822,075	-		Rru_A2422	0.47	+1.4
2,822,075	-		Rru_A2422	0.47	+0.6
2,822,075	-		Rru_A2422	0.47	-1.0
2,822,075	-		Rru_A2422	0.47	-0.2
2,822,083	+		Rru_A2422	0.47	+0.1
2,822,083	+		Rru_A2422	0.47	-0.0
2,822,083	+		Rru_A2422	0.47	+0.2
2,822,084	-		Rru_A2422	0.48	-0.2
2,822,084	-		Rru_A2422	0.48	-0.7
2,822,244	+		Rru_A2422	0.62	+0.3
2,822,244	+		Rru_A2422	0.62	-1.6