Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2419

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,817,668	-		Rru_A2417	0.65	-0.0
2,817,697	+		Rru_A2417	0.68	+0.4
2,817,698	-		Rru_A2417	0.68	+0.5
2,817,698	-		Rru_A2417	0.68	-0.2
2,817,763	+		Rru_A2417	0.77	+0.5
2,817,763	+		Rru_A2417	0.77	+0.8
2,817,763	+		Rru_A2417	0.77	-0.0
2,817,764	-		Rru_A2417	0.77	-1.0
2,817,764	-		Rru_A2417	0.77	+0.8
2,817,947	+				-0.0
2,817,948	-				-0.1
2,817,977	-				-0.5
2,818,121	+		Rru_A2418	0.18	-0.1
2,818,122	-		Rru_A2418	0.18	+1.0
2,818,122	-		Rru_A2418	0.18	+1.0
2,818,122	-		Rru_A2418	0.18	+0.7
2,818,128	-		Rru_A2418	0.19	+0.8
2,818,184	+		Rru_A2418	0.27	-0.3
2,818,610	+				+0.5
2,818,610	+				+0.6
2,818,610	+				+1.1
2,818,610	+				+0.8
2,818,610	+				+0.8
2,818,610	+				-0.0
2,818,610	+				+1.0
2,818,610	+				-0.1
2,818,611	-				+0.2
2,818,611	-				+2.0
2,818,611	-				-0.0
2,818,611	-				-0.0
2,818,611	-				-0.3
2,818,611	-				+0.9
2,818,611	-				+0.6
2,818,611	-				-0.0
2,818,611	-				-0.0
2,819,016	-		Rru_A2419	0.45	+0.8
2,819,016	-		Rru_A2419	0.45	+0.5
2,819,139	+		Rru_A2419	0.61	-0.0
2,819,139	+		Rru_A2419	0.61	+0.6
2,819,139	+		Rru_A2419	0.61	+0.8
2,819,140	-		Rru_A2419	0.61	-0.0
2,819,412	+				+0.0
2,819,419	+				+0.5
2,819,420	-				+1.2
2,819,420	-				+0.5
2,819,576	+				+1.1
2,819,589	+				+0.7
2,819,590	-				+0.1
2,819,591	+				+0.7
2,819,591	+				+0.5
2,819,591	+				+0.3
2,819,591	+				-0.0
2,819,591	+				+0.5
2,819,591	+				+1.2
2,819,591	+				-0.0
2,819,592	-				+0.7
2,819,592	-				+1.0
2,819,631	+				-0.0
2,819,704	+				-0.6
2,819,705	-				+0.2
2,819,948	+		Rru_A2420	0.49	-0.0
2,819,948	+		Rru_A2420	0.49	+1.1
2,819,948	+		Rru_A2420	0.49	+0.2
2,819,949	-		Rru_A2420	0.49	-1.0
2,820,286	+				+0.3
2,820,286	+				-0.0
2,820,286	+				+0.9
2,820,286	+				+0.6
2,820,287	-				-1.0
2,820,287	-				-0.0
2,820,356	+				-2.2
2,820,357	-				-1.2
2,820,396	-				-1.0