Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2413

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,813,927	-				-0.0
2,813,927	-				-0.0
2,813,927	-				+0.5
2,813,944	-				-0.0
2,813,987	-				+0.1
2,814,036	-				-0.0
2,814,038	-				-0.0
2,814,038	-				-0.0
2,814,038	-				-0.2
2,814,038	-				-0.0
2,814,043	-				-0.1
2,814,043	-				-0.9
2,814,142	+				-0.0
2,814,142	+				-0.0
2,814,143	-				-0.1
2,814,143	-				+0.4
2,814,143	-				-0.0
2,814,143	-				+1.0
2,814,167	+				-0.0
2,814,167	+				-0.0
2,814,168	-				-0.0
2,814,168	-				-0.2
2,814,371	+				-2.7
2,814,372	-				-0.0
2,814,372	-				+0.7
2,814,372	-				-0.0
2,814,372	-				-0.0
2,814,439	-		Rru_A2413	0.13	-1.0
2,814,439	-		Rru_A2413	0.13	-0.0
2,814,580	-		Rru_A2413	0.21	-0.7
2,814,580	-		Rru_A2413	0.21	-2.0
2,814,664	-		Rru_A2413	0.26	-0.0
2,814,665	+		Rru_A2413	0.26	-1.3
2,814,666	-		Rru_A2413	0.26	-1.8
2,814,666	-		Rru_A2413	0.26	-2.9
2,814,744	-		Rru_A2413	0.30	-1.0
2,814,773	-		Rru_A2413	0.32	-1.9
2,814,918	+		Rru_A2413	0.40	-1.8
2,814,918	+		Rru_A2413	0.40	-2.3
2,814,918	+		Rru_A2413	0.40	-1.6
2,814,918	+		Rru_A2413	0.40	-2.6
2,814,918	+		Rru_A2413	0.40	-0.0
2,814,918	+		Rru_A2413	0.40	-0.0
2,814,918	+		Rru_A2413	0.40	-0.8
2,814,919	-		Rru_A2413	0.40	+0.3
2,814,919	-		Rru_A2413	0.40	-2.0
2,814,984	+		Rru_A2413	0.44	-2.1
2,814,985	-		Rru_A2413	0.44	-4.2
2,814,985	-		Rru_A2413	0.44	-2.8
2,814,985	-		Rru_A2413	0.44	-2.9
2,814,987	+		Rru_A2413	0.44	-3.9
2,814,987	+		Rru_A2413	0.44	-1.8
2,814,988	-		Rru_A2413	0.44	-1.9
2,814,988	-		Rru_A2413	0.44	-0.0
2,815,000	+		Rru_A2413	0.45	-1.4
2,815,001	-		Rru_A2413	0.45	-0.0
2,815,001	-		Rru_A2413	0.45	-2.4
2,815,046	+		Rru_A2413	0.47	-2.4
2,815,046	+		Rru_A2413	0.47	-2.5
2,815,046	+		Rru_A2413	0.47	-0.9
2,815,110	+		Rru_A2413	0.51	-1.6
2,815,110	+		Rru_A2413	0.51	-0.0
2,815,110	+		Rru_A2413	0.51	-1.6
2,815,111	-		Rru_A2413	0.51	-0.4
2,815,111	-		Rru_A2413	0.51	-1.2
2,815,111	-		Rru_A2413	0.51	-1.1
2,815,111	-		Rru_A2413	0.51	-1.6
2,815,111	-		Rru_A2413	0.51	-1.8
2,815,112	+		Rru_A2413	0.51	-0.0
2,815,112	+		Rru_A2413	0.51	-0.0
2,815,112	+		Rru_A2413	0.51	-0.0
2,815,112	+		Rru_A2413	0.51	-1.7
2,815,113	-		Rru_A2413	0.51	-2.2
2,815,113	-		Rru_A2413	0.51	-1.5
2,815,113	-		Rru_A2413	0.51	-1.0
2,815,113	-		Rru_A2413	0.51	-0.0
2,815,113	-		Rru_A2413	0.51	-1.9
2,815,142	+		Rru_A2413	0.53	-2.0
2,815,142	+		Rru_A2413	0.53	-1.1
2,815,142	+		Rru_A2413	0.53	-2.1
2,815,227	+		Rru_A2413	0.57	-0.0
2,815,228	-		Rru_A2413	0.57	-0.0
2,815,451	+		Rru_A2413	0.70	-1.7
2,815,452	-		Rru_A2413	0.70	-0.0
2,815,452	-		Rru_A2413	0.70	-1.0
2,815,452	-		Rru_A2413	0.70	-0.0
2,815,455	+		Rru_A2413	0.70	-2.0
2,815,455	+		Rru_A2413	0.70	-2.0
2,815,456	-		Rru_A2413	0.70	-0.0
2,815,456	-		Rru_A2413	0.70	-3.1
2,815,494	+		Rru_A2413	0.72	-1.7
2,815,494	+		Rru_A2413	0.72	-0.0
2,815,542	+		Rru_A2413	0.75	-0.0
2,815,542	+		Rru_A2413	0.75	-1.6
2,815,542	+		Rru_A2413	0.75	-2.6
2,815,542	+		Rru_A2413	0.75	-1.1
2,815,543	-		Rru_A2413	0.75	-3.2
2,815,543	-		Rru_A2413	0.75	-2.5
2,815,543	-		Rru_A2413	0.75	-1.4
2,815,543	-		Rru_A2413	0.75	-0.0
2,815,557	+		Rru_A2413	0.76	-1.3
2,815,641	+		Rru_A2413	0.80	-0.0
2,815,641	+		Rru_A2413	0.80	-1.0
2,815,642	-		Rru_A2413	0.80	-2.0
2,815,642	-		Rru_A2413	0.80	-1.8
2,815,707	+		Rru_A2413	0.84	-2.8
2,815,707	+		Rru_A2413	0.84	-3.3
2,815,708	-		Rru_A2413	0.84	-2.4
2,815,749	-		Rru_A2413	0.86	-0.9
2,815,781	+		Rru_A2413	0.88	-1.0
2,815,781	+		Rru_A2413	0.88	+1.0
2,815,782	-		Rru_A2413	0.88	-0.0
2,815,785	+		Rru_A2413	0.88	-1.1
2,815,785	+		Rru_A2413	0.88	-0.0
2,815,785	+		Rru_A2413	0.88	-1.9
2,815,786	-		Rru_A2413	0.88	-0.9
2,815,802	+		Rru_A2413	0.89	-0.0
2,815,803	-		Rru_A2413	0.89	-0.0
2,815,971	+				-0.0
2,815,971	+				-0.0
2,815,972	-				-0.0
2,815,992	+				+0.5
2,816,078	-				+1.8
2,816,195	+		Rru_A2414	0.30	-0.1
2,816,473	+				-0.0
2,816,479	+				-0.0
2,816,479	+				+0.5
2,816,480	-				-0.9
2,816,480	-				-1.5
2,816,480	-				+0.6
2,816,480	-				-0.3
2,816,496	+				-0.0
2,816,496	+				+1.0
2,816,496	+				+0.5
2,816,496	+				-1.0
2,816,496	+				-0.4
2,816,496	+				-1.0
2,816,497	-				-0.0
2,816,497	-				-0.0
2,816,497	-				+0.9
2,816,497	-				+0.6
2,816,497	-				+0.5
2,816,497	-				+0.0
2,816,497	-				-0.0
2,816,497	-				+0.8
2,816,500	+				-1.0
2,816,500	+				-0.0
2,816,500	+				+0.3
2,816,501	-				+0.3
2,816,501	-				+0.5
2,816,501	-				+0.4
2,816,507	+				-0.0
2,816,508	-				+0.8
2,816,539	+				-0.8
2,816,644	+		Rru_A2415	0.47	-0.0
2,816,644	+		Rru_A2415	0.47	-1.0
2,816,645	-		Rru_A2415	0.47	+2.0
2,816,738	+				-0.0
2,816,818	-		Rru_A2416	0.24	-0.0
2,816,818	-		Rru_A2416	0.24	+0.7
2,816,952	+		Rru_A2416	0.60	-0.0