Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2409

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,808,774	-				-0.0
2,808,774	-				+1.2
2,808,841	+				+1.3
2,808,841	+				-0.0
2,808,842	-				-1.6
2,809,264	-		Rru_A2409	0.34	+1.1
2,809,264	-		Rru_A2409	0.34	+1.4
2,809,264	-		Rru_A2409	0.34	-0.0
2,809,264	-		Rru_A2409	0.34	+0.8
2,809,265	+		Rru_A2409	0.34	+1.3
2,809,265	+		Rru_A2409	0.34	+1.6
2,809,265	+		Rru_A2409	0.34	-0.0
2,809,265	+		Rru_A2409	0.34	-0.0
2,809,265	+		Rru_A2409	0.34	+0.1
2,809,265	+		Rru_A2409	0.34	-0.0
2,809,265	+		Rru_A2409	0.34	-0.0
2,809,265	+		Rru_A2409	0.34	+0.8
2,809,265	+		Rru_A2409	0.34	-0.0
2,809,265	+		Rru_A2409	0.34	+1.2
2,809,265	+		Rru_A2409	0.34	-0.0
2,809,265	+		Rru_A2409	0.34	-0.0
2,809,265	+		Rru_A2409	0.34	+0.7
2,809,265	+		Rru_A2409	0.34	-0.3
2,809,265	+		Rru_A2409	0.34	+1.2
2,809,265	+		Rru_A2409	0.34	-0.0
2,809,265	+		Rru_A2409	0.34	+0.6
2,809,265	+		Rru_A2409	0.34	+0.7
2,809,266	-		Rru_A2409	0.34	-0.0
2,809,266	-		Rru_A2409	0.34	-0.0
2,809,266	-		Rru_A2409	0.34	+0.4
2,809,266	-		Rru_A2409	0.34	+1.3
2,809,266	-		Rru_A2409	0.34	-0.0
2,809,266	-		Rru_A2409	0.34	-0.0
2,809,269	+		Rru_A2409	0.34	+0.6
2,809,269	+		Rru_A2409	0.34	+0.9
2,809,269	+		Rru_A2409	0.34	+0.3
2,809,269	+		Rru_A2409	0.34	-0.0
2,809,269	+		Rru_A2409	0.34	+1.6
2,809,269	+		Rru_A2409	0.34	-0.0
2,809,269	+		Rru_A2409	0.34	-0.0
2,809,269	+		Rru_A2409	0.34	+1.0
2,809,270	-		Rru_A2409	0.35	-0.0
2,809,270	-		Rru_A2409	0.35	+0.8
2,809,524	+		Rru_A2409	0.60	+0.6
2,809,526	+		Rru_A2409	0.60	+1.8
2,809,526	+		Rru_A2409	0.60	+1.0
2,809,526	+		Rru_A2409	0.60	-0.0
2,809,526	+		Rru_A2409	0.60	-0.0
2,809,527	-		Rru_A2409	0.60	-0.2
2,809,814	+		Rru_A2409	0.88	+1.3
2,809,936	+				-0.0
2,809,936	+				+0.1
2,809,937	-				+0.5
2,810,052	-				-1.0
2,810,165	+				-0.0
2,810,165	+				+1.2
2,810,166	-				+1.2
2,810,166	-				+3.1
2,810,406	-		Rru_A2410	0.19	-0.0
2,810,406	-		Rru_A2410	0.19	-0.0
2,810,406	-		Rru_A2410	0.19	-0.0
2,810,408	+		Rru_A2410	0.19	-1.0
2,810,409	-		Rru_A2410	0.19	-1.2
2,810,409	-		Rru_A2410	0.19	-1.8