Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2405

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,799,036	+				-0.2
2,799,036	+				-0.0
2,799,037	-				-1.0
2,799,037	-				-1.0
2,799,037	-				-0.0
2,799,037	-				-0.0
2,799,037	-				-2.3
2,799,037	-				-1.4
2,799,037	-				-2.1
2,799,037	-				-0.0
2,799,295	+		Rru_A2404	0.29	+0.2
2,799,295	+		Rru_A2404	0.29	-2.8
2,799,328	+		Rru_A2404	0.33	-2.2
2,799,328	+		Rru_A2404	0.33	-2.6
2,799,329	-		Rru_A2404	0.33	-1.1
2,799,422	-		Rru_A2404	0.44	-1.2
2,799,422	-		Rru_A2404	0.44	-4.0
2,799,556	+		Rru_A2404	0.59	-0.0
2,799,558	+		Rru_A2404	0.59	-1.0
2,799,558	+		Rru_A2404	0.59	-1.7
2,799,559	-		Rru_A2404	0.59	-3.2
2,799,559	-		Rru_A2404	0.59	-0.7
2,799,559	-		Rru_A2404	0.59	-0.0
2,799,559	-		Rru_A2404	0.59	-2.3
2,799,604	+		Rru_A2404	0.65	-0.0
2,799,604	+		Rru_A2404	0.65	+0.6
2,799,613	+		Rru_A2404	0.66	-0.0
2,799,613	+		Rru_A2404	0.66	-0.0
2,799,613	+		Rru_A2404	0.66	-0.0
2,799,613	+		Rru_A2404	0.66	-0.9
2,799,613	+		Rru_A2404	0.66	-0.0
2,799,613	+		Rru_A2404	0.66	-0.0
2,799,614	-		Rru_A2404	0.66	-1.8
2,799,614	-		Rru_A2404	0.66	-4.3
2,799,614	-		Rru_A2404	0.66	-2.8
2,799,614	-		Rru_A2404	0.66	-2.2
2,799,614	-		Rru_A2404	0.66	-1.2
2,799,614	-		Rru_A2404	0.66	-4.3
2,799,614	-		Rru_A2404	0.66	-0.0
2,799,614	-		Rru_A2404	0.66	-2.3
2,799,767	-		Rru_A2404	0.83	-2.6
2,800,250	+		Rru_A2405	0.13	-1.7
2,800,250	+		Rru_A2405	0.13	-0.0
2,800,251	-		Rru_A2405	0.13	-1.5
2,800,251	-		Rru_A2405	0.13	-2.2
2,800,274	+		Rru_A2405	0.14	-1.4
2,800,636	+		Rru_A2405	0.32	-0.0
2,800,658	+		Rru_A2405	0.33	-1.8
2,800,877	+		Rru_A2405	0.44	-0.0
2,800,877	+		Rru_A2405	0.44	-0.0
2,800,877	+		Rru_A2405	0.44	-0.0
2,800,877	+		Rru_A2405	0.44	-2.3
2,800,903	+		Rru_A2405	0.45	-2.9
2,801,243	+		Rru_A2405	0.62	-0.0
2,801,244	-		Rru_A2405	0.62	-2.2
2,801,244	-		Rru_A2405	0.62	-0.0
2,801,405	-		Rru_A2405	0.70	-1.6
2,801,656	+		Rru_A2405	0.82	-0.0
2,801,656	+		Rru_A2405	0.82	+0.7
2,801,657	-		Rru_A2405	0.82	-0.0
2,801,657	-		Rru_A2405	0.82	-0.0
2,802,024	-				-0.0
2,802,184	+				-0.0
2,802,184	+				-2.2
2,802,197	+				+0.6
2,802,197	+				+1.3
2,802,198	-				+0.5
2,802,200	+				+0.4
2,802,491	+				-0.0
2,802,491	+				-0.0
2,802,492	-				-0.0
2,802,541	-				+0.3
2,802,659	+				-0.0
2,802,659	+				+0.2
2,802,659	+				+1.7
2,802,659	+				+0.8
2,802,660	-				-0.0
2,802,660	-				+0.3
2,802,660	-				+0.9
2,802,660	-				+1.0
2,802,770	+		Rru_A2406	0.11	-0.3
2,802,783	+		Rru_A2406	0.12	+0.1
2,802,784	-		Rru_A2406	0.12	-0.0
2,802,791	+		Rru_A2406	0.12	+0.3
2,802,792	-		Rru_A2406	0.12	-0.0
2,802,792	-		Rru_A2406	0.12	-0.2
2,802,792	-		Rru_A2406	0.12	+0.0
2,802,792	-		Rru_A2406	0.12	+0.1
2,802,794	+		Rru_A2406	0.12	-0.0
2,802,794	+		Rru_A2406	0.12	+0.1
2,802,794	+		Rru_A2406	0.12	-0.0
2,802,794	+		Rru_A2406	0.12	-0.4
2,802,794	+		Rru_A2406	0.12	-0.0
2,802,794	+		Rru_A2406	0.12	+0.1
2,802,794	+		Rru_A2406	0.12	+1.0
2,802,794	+		Rru_A2406	0.12	+0.5
2,802,794	+		Rru_A2406	0.12	+1.0
2,802,795	-		Rru_A2406	0.12	-1.0