Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2401

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,795,051	+		Rru_A2400	0.39	-0.4
2,795,052	-		Rru_A2400	0.39	+1.3
2,795,114	+		Rru_A2400	0.43	-0.3
2,795,114	+		Rru_A2400	0.43	+1.2
2,795,115	-		Rru_A2400	0.43	-1.4
2,795,172	-		Rru_A2400	0.47	+0.7
2,795,172	-		Rru_A2400	0.47	-0.4
2,795,172	-		Rru_A2400	0.47	-0.0
2,795,172	-		Rru_A2400	0.47	-0.0
2,795,172	-		Rru_A2400	0.47	-0.0
2,795,214	+		Rru_A2400	0.50	-0.6
2,795,481	+		Rru_A2400	0.70	+0.1
2,795,482	-		Rru_A2400	0.70	-0.5
2,795,482	-		Rru_A2400	0.70	-0.0
2,795,529	-		Rru_A2400	0.73	-0.0
2,795,693	+		Rru_A2400	0.85	+0.4
2,795,693	+		Rru_A2400	0.85	+0.0
2,795,693	+		Rru_A2400	0.85	-0.0
2,795,693	+		Rru_A2400	0.85	-0.0
2,795,693	+		Rru_A2400	0.85	-2.0
2,795,693	+		Rru_A2400	0.85	-0.0
2,795,694	-		Rru_A2400	0.85	+0.3
2,795,694	-		Rru_A2400	0.85	-0.0
2,795,694	-		Rru_A2400	0.85	-0.0
2,795,694	-		Rru_A2400	0.85	+0.4
2,795,795	+				-0.0
2,795,795	+				+0.7
2,795,795	+				-0.0
2,795,795	+				-0.0
2,795,796	-				+0.5
2,795,823	+				+0.8
2,795,823	+				-0.0
2,795,824	-				+0.4
2,795,824	-				+1.0
2,795,824	-				-0.0
2,795,824	-				+1.4
2,795,824	-				-0.0
2,795,825	+				-0.0
2,795,825	+				-0.0
2,795,825	+				+0.3
2,795,825	+				+1.0
2,795,826	-				-0.3
2,795,826	-				+0.7
2,795,826	-				+0.4
2,795,826	-				+0.1
2,795,826	-				-0.0
2,795,826	-				-0.0
2,795,888	+				+1.8
2,795,888	+				-1.0
2,795,889	-				-0.0
2,795,889	-				-0.0
2,795,922	+				-1.0
2,795,922	+				-0.0
2,795,922	+				-0.0
2,795,923	-				-0.0
2,795,945	+				-0.6
2,795,945	+				-1.2
2,795,945	+				-0.3
2,795,945	+				-0.0
2,795,946	-				-0.0
2,795,946	-				-0.0
2,795,946	-				-0.0
2,795,946	-				-0.0
2,796,171	+		Rru_A2401	0.15	-1.0
2,796,171	+		Rru_A2401	0.15	-2.3
2,796,172	-		Rru_A2401	0.15	-0.0
2,796,172	-		Rru_A2401	0.15	-0.0
2,796,172	-		Rru_A2401	0.15	-2.4
2,796,172	-		Rru_A2401	0.15	-1.7
2,796,172	-		Rru_A2401	0.15	-0.0
2,796,368	-		Rru_A2401	0.35	-0.0
2,796,663	+		Rru_A2401	0.67	-0.0
2,797,010	-				-0.0
2,797,024	-				-1.0
2,797,822	+				-0.0
2,797,822	+				+1.2
2,797,822	+				+0.7
2,797,823	-				-2.2
2,797,823	-				-2.5
2,797,823	-				-1.6
2,797,823	-				-2.5