Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2398

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,788,558	+		Rru_A2397	0.62	-0.0
2,788,558	+		Rru_A2397	0.62	-1.0
2,788,558	+		Rru_A2397	0.62	-0.0
2,788,558	+		Rru_A2397	0.62	-0.0
2,788,559	-		Rru_A2397	0.62	-1.0
2,788,559	-		Rru_A2397	0.62	-0.0
2,788,559	-		Rru_A2397	0.62	-0.0
2,788,559	-		Rru_A2397	0.62	-0.0
2,788,559	-		Rru_A2397	0.62	-0.0
2,788,559	-		Rru_A2397	0.62	+0.2
2,788,560	+		Rru_A2397	0.62	-0.0
2,788,560	+		Rru_A2397	0.62	+0.7
2,788,561	-		Rru_A2397	0.62	-0.0
2,788,561	-		Rru_A2397	0.62	+0.8
2,788,702	+		Rru_A2397	0.89	+0.1
2,788,703	-		Rru_A2397	0.89	-0.0
2,788,823	-				-0.0
2,789,340	+				-0.0
2,789,341	-				-2.9
2,789,425	+				-1.3
2,789,425	+				-0.0
2,789,631	+				+0.8
2,789,631	+				-2.3
2,789,631	+				-1.6
2,789,631	+				-2.9
2,789,631	+				-3.3
2,789,632	-				-2.5
2,789,632	-				-3.4
2,789,632	-				-2.4
2,789,632	-				-1.0
2,789,635	+				-2.8
2,789,635	+				-1.0
2,789,635	+				-0.0
2,789,635	+				-2.0
2,789,635	+				-3.5
2,789,636	-				-1.6
2,789,636	-				-0.2
2,789,636	-				-0.0
2,789,636	-				-3.0
2,789,636	-				-1.0
2,789,636	-				-3.1
2,789,636	-				-1.9
2,790,049	+		Rru_A2398	0.19	-2.0
2,790,049	+		Rru_A2398	0.19	-3.1
2,790,050	-		Rru_A2398	0.19	-0.0
2,790,079	+		Rru_A2398	0.20	-2.4
2,790,079	+		Rru_A2398	0.20	-1.6
2,790,079	+		Rru_A2398	0.20	-0.0
2,790,079	+		Rru_A2398	0.20	-0.0
2,790,079	+		Rru_A2398	0.20	-0.0
2,790,079	+		Rru_A2398	0.20	-0.0
2,790,079	+		Rru_A2398	0.20	-0.0
2,790,080	-		Rru_A2398	0.20	-3.3
2,790,080	-		Rru_A2398	0.20	-1.0
2,790,080	-		Rru_A2398	0.20	-4.0
2,790,080	-		Rru_A2398	0.20	-1.8
2,790,080	-		Rru_A2398	0.20	-0.0
2,790,080	-		Rru_A2398	0.20	-0.0
2,790,081	+		Rru_A2398	0.20	-0.0
2,790,081	+		Rru_A2398	0.20	-1.0
2,790,082	-		Rru_A2398	0.20	-2.0
2,790,131	-		Rru_A2398	0.22	-2.3
2,790,364	+		Rru_A2398	0.28	-2.2
2,790,364	+		Rru_A2398	0.28	-1.0
2,790,365	-		Rru_A2398	0.28	-0.0
2,790,452	-		Rru_A2398	0.31	-2.1
2,790,667	-		Rru_A2398	0.37	-0.0
2,790,718	+		Rru_A2398	0.38	-4.8
2,790,718	+		Rru_A2398	0.38	-1.9
2,790,719	-		Rru_A2398	0.38	-1.0
2,790,719	-		Rru_A2398	0.38	-1.6
2,790,727	+		Rru_A2398	0.39	-1.0
2,790,728	-		Rru_A2398	0.39	-0.0
2,790,921	+		Rru_A2398	0.44	-0.0
2,790,921	+		Rru_A2398	0.44	-2.4
2,790,922	-		Rru_A2398	0.44	-0.0
2,790,922	-		Rru_A2398	0.44	-2.2
2,791,002	+		Rru_A2398	0.46	-1.4
2,791,002	+		Rru_A2398	0.46	-0.0
2,791,133	-		Rru_A2398	0.50	-0.0
2,791,133	-		Rru_A2398	0.50	-2.0
2,791,133	-		Rru_A2398	0.50	-0.0
2,791,154	+		Rru_A2398	0.50	-0.0
2,791,154	+		Rru_A2398	0.50	-1.8
2,791,154	+		Rru_A2398	0.50	-0.0
2,791,155	-		Rru_A2398	0.51	-3.7
2,791,155	-		Rru_A2398	0.51	-0.0
2,791,537	+		Rru_A2398	0.61	-2.6
2,791,537	+		Rru_A2398	0.61	-2.0
2,791,539	+		Rru_A2398	0.61	-4.1
2,791,539	+		Rru_A2398	0.61	-0.0
2,791,539	+		Rru_A2398	0.61	-0.0
2,791,540	-		Rru_A2398	0.61	-3.6
2,791,540	-		Rru_A2398	0.61	-3.7
2,791,691	+		Rru_A2398	0.66	-0.0
2,791,692	-		Rru_A2398	0.66	-1.5
2,791,837	+		Rru_A2398	0.70	-2.8
2,791,837	+		Rru_A2398	0.70	-3.0
2,791,838	-		Rru_A2398	0.70	-0.8
2,791,909	+		Rru_A2398	0.72	-2.9
2,791,936	+		Rru_A2398	0.72	-3.6
2,791,937	-		Rru_A2398	0.72	-1.6
2,792,233	+		Rru_A2398	0.81	-3.0
2,792,233	+		Rru_A2398	0.81	-2.1
2,792,281	+		Rru_A2398	0.82	-1.4
2,792,281	+		Rru_A2398	0.82	-2.7
2,792,337	+		Rru_A2398	0.84	-1.3
2,792,362	+		Rru_A2398	0.84	-0.0
2,792,488	+		Rru_A2398	0.88	-4.1
2,792,488	+		Rru_A2398	0.88	-1.7
2,792,488	+		Rru_A2398	0.88	-0.0
2,792,488	+		Rru_A2398	0.88	-0.0
2,792,488	+		Rru_A2398	0.88	-0.0
2,792,488	+		Rru_A2398	0.88	-1.0
2,792,488	+		Rru_A2398	0.88	-0.0
2,792,489	-		Rru_A2398	0.88	-1.0
2,792,489	-		Rru_A2398	0.88	-0.0
2,792,489	-		Rru_A2398	0.88	-1.0
2,792,557	+		Rru_A2398	0.90	-1.8
2,792,557	+		Rru_A2398	0.90	-0.0
2,792,557	+		Rru_A2398	0.90	-0.0
2,792,584	+				-0.0
2,792,585	-				-0.6
2,792,587	-				-1.2
2,792,587	-				-1.9
2,792,608	+				-0.0
2,792,609	-				-0.0
2,792,609	-				-3.0
2,792,671	+				-3.5
2,792,671	+				-4.0
2,792,672	-				-2.1
2,792,752	+				-0.6
2,792,752	+				-0.0
2,792,752	+				-0.0
2,792,752	+				-2.7
2,792,752	+				-0.0
2,792,753	-				-0.0
2,792,753	-				-0.0
2,792,753	-				-2.9
2,792,753	-				-1.0
2,792,754	+				-3.2
2,792,754	+				-2.2
2,792,754	+				-0.0
2,792,754	+				-2.4
2,792,755	-				-4.3
2,792,755	-				-3.5
2,792,755	-				-0.0
2,792,755	-				-0.0
2,792,755	-				-1.1
2,792,755	-				-0.0
2,792,755	-				-0.9
2,792,806	+				-1.0
2,792,806	+				-2.6
2,792,807	-				-2.0
2,792,914	+				+2.4
2,793,131	-				+0.5
2,793,131	-				-0.9
2,793,131	-				-0.0
2,793,134	-				-0.0
2,793,207	-				-0.0
2,793,233	-				-1.0
2,793,317	-				-0.0
2,793,424	+		Rru_A2399	0.12	-0.0
2,793,425	-		Rru_A2399	0.12	-0.0
2,793,529	+		Rru_A2399	0.22	+0.2
2,793,529	+		Rru_A2399	0.22	-0.0
2,793,529	+		Rru_A2399	0.22	-0.0
2,793,598	+		Rru_A2399	0.28	-0.0
2,793,598	+		Rru_A2399	0.28	-0.0
2,793,598	+		Rru_A2399	0.28	-0.0
2,793,599	-		Rru_A2399	0.28	-0.0
2,793,600	+		Rru_A2399	0.28	-0.0
2,793,619	+		Rru_A2399	0.30	-0.0
2,793,619	+		Rru_A2399	0.30	-1.0
2,793,620	-		Rru_A2399	0.30	-0.0
2,793,629	-		Rru_A2399	0.31	-1.0