Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2395

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,783,616	+		Rru_A2394	0.21	-1.0
2,783,617	-		Rru_A2394	0.21	-0.0
2,783,617	-		Rru_A2394	0.21	-0.0
2,783,646	+		Rru_A2394	0.23	+0.5
2,783,646	+		Rru_A2394	0.23	-0.0
2,783,646	+		Rru_A2394	0.23	+0.9
2,783,646	+		Rru_A2394	0.23	+1.0
2,783,647	-		Rru_A2394	0.24	-0.0
2,783,647	-		Rru_A2394	0.24	+0.2
2,783,647	-		Rru_A2394	0.24	-1.0
2,783,647	-		Rru_A2394	0.24	-0.0
2,783,647	-		Rru_A2394	0.24	-0.0
2,783,647	-		Rru_A2394	0.24	-1.2
2,783,647	-		Rru_A2394	0.24	+0.3
2,783,685	+		Rru_A2394	0.27	+0.7
2,783,691	+		Rru_A2394	0.27	-0.0
2,783,691	+		Rru_A2394	0.27	+0.6
2,783,691	+		Rru_A2394	0.27	-0.0
2,783,691	+		Rru_A2394	0.27	-0.0
2,783,691	+		Rru_A2394	0.27	+0.3
2,783,691	+		Rru_A2394	0.27	-0.0
2,783,691	+		Rru_A2394	0.27	+0.3
2,783,691	+		Rru_A2394	0.27	+0.2
2,783,691	+		Rru_A2394	0.27	+0.4
2,783,692	-		Rru_A2394	0.27	-0.0
2,783,692	-		Rru_A2394	0.27	-0.4
2,783,692	-		Rru_A2394	0.27	-0.0
2,783,692	-		Rru_A2394	0.27	-0.4
2,783,692	-		Rru_A2394	0.27	+0.1
2,783,692	-		Rru_A2394	0.27	-0.0
2,783,692	-		Rru_A2394	0.27	-0.0
2,783,692	-		Rru_A2394	0.27	-0.0
2,783,692	-		Rru_A2394	0.27	-0.2
2,783,722	-		Rru_A2394	0.30	-0.0
2,783,722	-		Rru_A2394	0.30	-1.6
2,783,927	+		Rru_A2394	0.47	-0.0
2,784,048	+		Rru_A2394	0.57	-0.0
2,784,108	+		Rru_A2394	0.63	+1.2
2,784,108	+		Rru_A2394	0.63	-0.6
2,784,108	+		Rru_A2394	0.63	-0.0
2,784,109	-		Rru_A2394	0.63	-0.0
2,784,109	-		Rru_A2394	0.63	-1.4
2,784,231	+		Rru_A2394	0.73	-0.0
2,784,231	+		Rru_A2394	0.73	+1.4
2,784,231	+		Rru_A2394	0.73	-0.0
2,784,231	+		Rru_A2394	0.73	-0.4
2,784,231	+		Rru_A2394	0.73	-0.1
2,784,232	-		Rru_A2394	0.73	-1.6
2,784,285	+		Rru_A2394	0.77	+0.7
2,784,468	+				+0.2
2,784,468	+				+0.4
2,784,468	+				+0.3
2,784,469	-				-0.0
2,784,569	+				+0.9
2,784,570	-				+0.3
2,784,570	-				-1.6
2,784,606	-				-0.0
2,784,606	-				-0.0
2,784,608	+				-0.5
2,784,609	-				-0.0
2,784,609	-				-0.5
2,784,609	-				-1.0
2,784,609	-				-0.0
2,784,758	+				-0.0
2,784,845	+		Rru_A2395	0.12	-0.4
2,784,845	+		Rru_A2395	0.12	+0.5
2,784,845	+		Rru_A2395	0.12	-0.0
2,784,845	+		Rru_A2395	0.12	+0.8
2,784,845	+		Rru_A2395	0.12	-0.0
2,784,846	-		Rru_A2395	0.12	-0.7
2,784,846	-		Rru_A2395	0.12	-0.2
2,784,846	-		Rru_A2395	0.12	-0.0
2,784,846	-		Rru_A2395	0.12	+0.6
2,784,846	-		Rru_A2395	0.12	-0.0
2,784,944	+		Rru_A2395	0.16	-0.0
2,784,944	+		Rru_A2395	0.16	+0.4
2,784,945	-		Rru_A2395	0.16	-0.9
2,785,032	+		Rru_A2395	0.19	+0.9
2,785,032	+		Rru_A2395	0.19	-0.0
2,785,033	-		Rru_A2395	0.19	-0.8
2,785,044	-		Rru_A2395	0.20	-0.6
2,785,112	+		Rru_A2395	0.23	-1.4
2,785,112	+		Rru_A2395	0.23	-0.0
2,785,145	+		Rru_A2395	0.24	-0.0
2,785,146	-		Rru_A2395	0.24	-0.2
2,785,229	+		Rru_A2395	0.27	-0.0
2,785,229	+		Rru_A2395	0.27	-0.1
2,785,229	+		Rru_A2395	0.27	+1.0
2,785,230	-		Rru_A2395	0.28	-0.0
2,785,263	+		Rru_A2395	0.29	+0.1
2,785,263	+		Rru_A2395	0.29	+1.7
2,785,264	-		Rru_A2395	0.29	-0.4
2,785,264	-		Rru_A2395	0.29	-0.4
2,785,264	-		Rru_A2395	0.29	-0.2
2,785,265	+		Rru_A2395	0.29	+0.1
2,785,265	+		Rru_A2395	0.29	+1.1
2,785,265	+		Rru_A2395	0.29	-2.4
2,785,265	+		Rru_A2395	0.29	-0.0
2,785,266	-		Rru_A2395	0.29	-0.0
2,785,266	-		Rru_A2395	0.29	+0.0
2,785,409	+		Rru_A2395	0.35	-0.0
2,785,409	+		Rru_A2395	0.35	-0.3
2,785,410	-		Rru_A2395	0.35	-0.4
2,785,410	-		Rru_A2395	0.35	-0.0
2,785,481	+		Rru_A2395	0.38	-0.3
2,785,482	-		Rru_A2395	0.38	-0.0
2,785,493	+		Rru_A2395	0.38	+0.2
2,785,493	+		Rru_A2395	0.38	-1.0
2,785,493	+		Rru_A2395	0.38	+0.3
2,785,493	+		Rru_A2395	0.38	-1.0
2,785,493	+		Rru_A2395	0.38	-0.7
2,785,493	+		Rru_A2395	0.38	-0.0
2,785,493	+		Rru_A2395	0.38	-0.0
2,785,494	-		Rru_A2395	0.38	+0.3
2,785,494	-		Rru_A2395	0.38	-0.0
2,785,494	-		Rru_A2395	0.38	-1.0
2,785,494	-		Rru_A2395	0.38	-1.4
2,785,494	-		Rru_A2395	0.38	-0.0
2,785,547	+		Rru_A2395	0.41	+1.1
2,785,548	-		Rru_A2395	0.41	-0.1
2,785,548	-		Rru_A2395	0.41	-0.4
2,785,575	+		Rru_A2395	0.42	+0.6
2,785,701	-		Rru_A2395	0.47	+0.0
2,785,701	-		Rru_A2395	0.47	-0.7
2,785,703	+		Rru_A2395	0.47	-0.0
2,785,703	+		Rru_A2395	0.47	+0.1
2,785,703	+		Rru_A2395	0.47	+0.1
2,785,704	-		Rru_A2395	0.47	-0.0
2,785,704	-		Rru_A2395	0.47	-0.5
2,785,704	-		Rru_A2395	0.47	-0.0
2,785,736	+		Rru_A2395	0.48	-0.0
2,785,736	+		Rru_A2395	0.48	-0.0
2,785,737	-		Rru_A2395	0.48	-1.0
2,785,737	-		Rru_A2395	0.48	-0.0
2,785,790	+		Rru_A2395	0.50	-0.0
2,785,790	+		Rru_A2395	0.50	+0.1
2,785,791	-		Rru_A2395	0.51	-0.5
2,785,845	-		Rru_A2395	0.53	-0.0
2,785,845	-		Rru_A2395	0.53	-0.0
2,785,880	+		Rru_A2395	0.54	-0.0
2,785,880	+		Rru_A2395	0.54	+0.3
2,785,881	-		Rru_A2395	0.54	-0.0
2,785,881	-		Rru_A2395	0.54	-0.0
2,785,881	-		Rru_A2395	0.54	-0.0
2,785,881	-		Rru_A2395	0.54	+0.4
2,786,003	+		Rru_A2395	0.59	+0.8
2,786,003	+		Rru_A2395	0.59	+0.5
2,786,004	-		Rru_A2395	0.59	-1.3
2,786,190	+		Rru_A2395	0.67	-0.0
2,786,190	+		Rru_A2395	0.67	+0.1
2,786,223	-		Rru_A2395	0.68	-0.7
2,786,270	+		Rru_A2395	0.70	-0.6
2,786,270	+		Rru_A2395	0.70	-0.0
2,786,271	-		Rru_A2395	0.70	+0.8
2,786,271	-		Rru_A2395	0.70	-0.0
2,786,271	-		Rru_A2395	0.70	-0.0
2,786,271	-		Rru_A2395	0.70	-0.1
2,786,324	+		Rru_A2395	0.72	+0.3
2,786,324	+		Rru_A2395	0.72	-0.0
2,786,324	+		Rru_A2395	0.72	-0.0
2,786,324	+		Rru_A2395	0.72	-0.0
2,786,324	+		Rru_A2395	0.72	-0.0
2,786,324	+		Rru_A2395	0.72	-0.0
2,786,325	-		Rru_A2395	0.72	+0.1
2,786,370	-		Rru_A2395	0.74	-0.0
2,786,370	-		Rru_A2395	0.74	-0.0
2,786,414	+		Rru_A2395	0.76	+0.9
2,786,414	+		Rru_A2395	0.76	+1.0
2,786,415	-		Rru_A2395	0.76	-0.2
2,786,844	+				+0.6
2,786,845	-				-0.0
2,786,845	-				-0.0
2,787,022	+				-0.0
2,787,023	-				-0.5
2,787,674	+		Rru_A2396	0.54	-1.0
2,787,675	-		Rru_A2396	0.54	-0.7
2,787,675	-		Rru_A2396	0.54	+0.3
2,787,675	-		Rru_A2396	0.54	+0.5