Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2354

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,739,429	+		Rru_A2353	0.82	+0.9
2,739,429	+		Rru_A2353	0.82	+1.7
2,739,429	+		Rru_A2353	0.82	+1.2
2,739,430	-		Rru_A2353	0.82	-1.0
2,739,430	-		Rru_A2353	0.82	-0.0
2,739,430	-		Rru_A2353	0.82	-0.0
2,739,468	+		Rru_A2353	0.84	-0.0
2,739,495	+		Rru_A2353	0.86	+1.4
2,739,496	-		Rru_A2353	0.86	+0.8
2,739,552	+		Rru_A2353	0.90	-0.0
2,739,552	+		Rru_A2353	0.90	-2.0
2,739,566	+				+1.7
2,739,805	+				+1.4
2,739,805	+				+1.5
2,739,805	+				+1.9
2,739,805	+				+1.7
2,739,849	+				+1.6
2,739,850	-				-1.0
2,739,936	+				+1.7
2,739,937	-				-0.0
2,739,980	+				-0.0
2,739,981	-				-0.0
2,740,098	+				-1.6
2,740,098	+				-0.0
2,740,098	+				-1.6
2,740,099	-				-0.0
2,740,099	-				-1.5
2,740,099	-				-0.0
2,740,101	+				-1.6
2,740,494	+		Rru_A2354	0.32	-0.0
2,740,495	-		Rru_A2354	0.32	-0.0
2,741,231	+		Rru_A2354	0.77	-0.0
2,741,303	+		Rru_A2354	0.82	-0.0
2,741,304	-		Rru_A2354	0.82	-0.3
2,741,304	-		Rru_A2354	0.82	-1.7
2,741,304	-		Rru_A2354	0.82	-2.0
2,741,602	-				-0.0
2,742,052	-				-0.0
2,742,063	-				-0.0
2,742,226	+				-0.0
2,742,226	+				-0.0
2,742,226	+				+0.3
2,742,227	-				+1.1
2,742,227	-				-0.0
2,742,227	-				-0.0
2,742,227	-				+0.4
2,742,227	-				+1.2
2,742,227	-				-0.0
2,742,227	-				+0.2
2,742,227	-				+1.0
2,742,279	+				+0.4
2,742,279	+				-0.0
2,742,279	+				+0.7
2,742,280	-				-1.0
2,742,280	-				-0.0
2,742,305	+				+0.6
2,742,305	+				+0.5
2,742,305	+				-0.0
2,742,305	+				+0.7
2,742,376	+				+0.8
2,742,377	-				+0.7
2,742,377	-				-0.0
2,742,418	+				+0.3
2,742,550	+		Rru_A2356	0.16	+0.2
2,742,550	+		Rru_A2356	0.16	+1.2
2,742,550	+		Rru_A2356	0.16	+0.8
2,742,550	+		Rru_A2356	0.16	-1.0
2,742,550	+		Rru_A2356	0.16	-0.0
2,742,550	+		Rru_A2356	0.16	-1.0
2,742,550	+		Rru_A2356	0.16	+0.6
2,742,550	+		Rru_A2356	0.16	+0.9
2,742,550	+		Rru_A2356	0.16	-0.0
2,742,550	+		Rru_A2356	0.16	+0.7
2,742,550	+		Rru_A2356	0.16	+0.9
2,742,551	-		Rru_A2356	0.16	+0.2
2,742,551	-		Rru_A2356	0.16	+3.0
2,742,551	-		Rru_A2356	0.16	+0.4
2,742,551	-		Rru_A2356	0.16	-0.0
2,742,551	-		Rru_A2356	0.16	+0.8
2,742,551	-		Rru_A2356	0.16	-0.0
2,742,551	-		Rru_A2356	0.16	-0.0
2,742,551	-		Rru_A2356	0.16	-0.0
2,742,551	-		Rru_A2356	0.16	-1.0
2,742,551	-		Rru_A2356	0.16	-0.0
2,742,552	+		Rru_A2356	0.16	-1.4
2,742,552	+		Rru_A2356	0.16	-2.4
2,742,553	-		Rru_A2356	0.16	+0.2
2,742,553	-		Rru_A2356	0.16	+2.6
2,742,553	-		Rru_A2356	0.16	+1.5
2,742,553	-		Rru_A2356	0.16	+1.5