Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2344

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,717,387	-		Rru_A2343	0.82	-0.0
2,717,410	-		Rru_A2343	0.85	+0.1
2,717,550	+				-0.4
2,717,550	+				+0.9
2,717,551	-				+0.1
2,717,590	-				+1.0
2,717,590	-				+1.4
2,717,748	-				+0.6
2,717,767	-				+0.3
2,717,767	-				+0.5
2,717,767	-				+0.0
2,717,769	-				-0.0
2,717,769	-				-1.0
2,717,769	-				+0.3
2,717,795	+				+0.2
2,717,795	+				-1.6
2,717,852	+		Rru_A2344	0.14	-1.0
2,717,853	-		Rru_A2344	0.14	-0.0
2,717,853	-		Rru_A2344	0.14	-0.1
2,717,967	-		Rru_A2344	0.27	+0.3
2,718,007	-		Rru_A2344	0.31	-0.0
2,718,056	+		Rru_A2344	0.37	-1.0
2,718,056	+		Rru_A2344	0.37	-0.0
2,718,056	+		Rru_A2344	0.37	+0.3
2,718,057	-		Rru_A2344	0.37	+0.3
2,718,057	-		Rru_A2344	0.37	-1.6
2,718,164	+		Rru_A2344	0.49	-0.0
2,718,164	+		Rru_A2344	0.49	-0.0
2,718,164	+		Rru_A2344	0.49	+1.0
2,718,416	+		Rru_A2344	0.77	+0.4
2,718,416	+		Rru_A2344	0.77	-0.4
2,718,478	-		Rru_A2344	0.84	-0.0
2,718,478	-		Rru_A2344	0.84	+0.7
2,718,478	-		Rru_A2344	0.84	+0.9
2,718,479	+		Rru_A2344	0.85	+0.8
2,718,479	+		Rru_A2344	0.85	-0.0
2,718,479	+		Rru_A2344	0.85	+0.4
2,718,479	+		Rru_A2344	0.85	+1.0
2,718,479	+		Rru_A2344	0.85	-0.0
2,718,480	-		Rru_A2344	0.85	+0.6
2,718,480	-		Rru_A2344	0.85	-0.0
2,718,480	-		Rru_A2344	0.85	+1.8
2,718,480	-		Rru_A2344	0.85	-0.0
2,718,480	-		Rru_A2344	0.85	-1.9
2,718,480	-		Rru_A2344	0.85	+0.2
2,718,497	+		Rru_A2344	0.87	-0.0
2,718,497	+		Rru_A2344	0.87	-0.0
2,718,497	+		Rru_A2344	0.87	-0.0
2,718,497	+		Rru_A2344	0.87	-0.0
2,718,497	+		Rru_A2344	0.87	+0.2
2,718,497	+		Rru_A2344	0.87	+1.9
2,718,497	+		Rru_A2344	0.87	+0.6
2,718,498	-		Rru_A2344	0.87	+1.3
2,718,498	-		Rru_A2344	0.87	+0.8
2,718,498	-		Rru_A2344	0.87	+1.0
2,718,498	-		Rru_A2344	0.87	-0.0
2,718,498	-		Rru_A2344	0.87	-1.0
2,718,561	-				-0.3
2,718,562	+				-0.0
2,718,563	-				+0.1
2,718,563	-				+0.5
2,718,636	-				-0.0
2,718,797	+		Rru_A2345	0.13	-0.5
2,718,797	+		Rru_A2345	0.13	+1.1
2,718,798	-		Rru_A2345	0.13	-0.0
2,718,947	+		Rru_A2345	0.27	+1.0
2,718,948	-		Rru_A2345	0.27	+1.4
2,719,218	-		Rru_A2345	0.53	+0.3
2,719,248	+		Rru_A2345	0.56	+0.3
2,719,249	-		Rru_A2345	0.56	-0.5
2,719,249	-		Rru_A2345	0.56	-0.0
2,719,310	+		Rru_A2345	0.62	+0.5
2,719,312	+		Rru_A2345	0.62	+0.9
2,719,312	+		Rru_A2345	0.62	-0.0
2,719,312	+		Rru_A2345	0.62	+0.5
2,719,365	+		Rru_A2345	0.68	+0.6
2,719,365	+		Rru_A2345	0.68	-0.0
2,719,365	+		Rru_A2345	0.68	-1.0
2,719,365	+		Rru_A2345	0.68	-0.0
2,719,366	-		Rru_A2345	0.68	-0.0
2,719,373	+		Rru_A2345	0.68	-0.7
2,719,374	-		Rru_A2345	0.69	+1.6