Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2340

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,711,343	+		Rru_A2339	0.45	+0.4
2,711,344	-		Rru_A2339	0.45	-0.0
2,711,657	-		Rru_A2339	0.63	+0.8
2,711,803	+		Rru_A2339	0.71	-1.6
2,711,804	-		Rru_A2339	0.71	-0.0
2,712,132	+				-0.0
2,712,133	-				-0.0
2,712,226	+				+1.6
2,712,247	+				-0.0
2,712,247	+				+0.5
2,712,248	-				-0.1
2,712,248	-				+0.5
2,712,248	-				+0.3
2,712,420	+				+0.7
2,712,420	+				+0.3
2,712,421	-				-0.0
2,712,421	-				-0.0
2,712,723	+		Rru_A2340	0.23	-0.4
2,712,723	+		Rru_A2340	0.23	+0.7
2,712,723	+		Rru_A2340	0.23	-0.0
2,712,723	+		Rru_A2340	0.23	-0.0
2,712,724	-		Rru_A2340	0.23	+1.2
2,712,724	-		Rru_A2340	0.23	-0.0
2,712,724	-		Rru_A2340	0.23	-0.0
2,713,169	+		Rru_A2340	0.48	+0.8
2,713,169	+		Rru_A2340	0.48	-0.9
2,713,170	-		Rru_A2340	0.48	-0.0
2,713,170	-		Rru_A2340	0.48	+0.1
2,713,406	-		Rru_A2340	0.61	-1.0
2,713,407	+		Rru_A2340	0.61	-1.3
2,713,407	+		Rru_A2340	0.61	+0.7
2,713,408	-		Rru_A2340	0.61	-0.2
2,713,584	+		Rru_A2340	0.71	-0.0
2,713,585	-		Rru_A2340	0.71	+0.1
2,713,585	-		Rru_A2340	0.71	-0.0
2,713,585	-		Rru_A2340	0.71	+0.0
2,713,596	+		Rru_A2340	0.71	-0.7
2,713,596	+		Rru_A2340	0.71	+0.2
2,713,597	-		Rru_A2340	0.71	-0.0
2,713,597	-		Rru_A2340	0.71	+0.3
2,713,653	+		Rru_A2340	0.75	-0.0
2,713,653	+		Rru_A2340	0.75	+0.3
2,713,653	+		Rru_A2340	0.75	-0.0
2,713,654	-		Rru_A2340	0.75	-0.0
2,713,654	-		Rru_A2340	0.75	-0.0
2,713,859	-		Rru_A2340	0.86	-1.6
2,714,198	-				-1.0
2,714,313	+				+0.5
2,714,314	-				-0.0
2,714,434	-				-0.1
2,714,441	-				-0.0
2,714,508	+				-1.6
2,714,508	+				-0.3
2,714,508	+				+0.7
2,714,508	+				-0.0
2,714,509	-				-0.0