Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2312

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,674,826	+		Rru_A2311	0.32	-0.1
2,674,826	+		Rru_A2311	0.32	-0.0
2,674,827	-		Rru_A2311	0.33	+0.6
2,674,934	-		Rru_A2311	0.46	+0.1
2,674,973	-		Rru_A2311	0.51	-0.0
2,675,047	-		Rru_A2311	0.60	+0.8
2,675,047	-		Rru_A2311	0.60	+0.2
2,675,126	+		Rru_A2311	0.70	-0.0
2,675,127	-		Rru_A2311	0.71	+0.1
2,675,183	+		Rru_A2311	0.78	+0.4
2,675,183	+		Rru_A2311	0.78	+1.0
2,675,417	+				+0.0
2,675,417	+				+0.6
2,675,417	+				-0.0
2,675,417	+				+1.0
2,675,418	-				+0.5
2,675,452	+				+0.8
2,675,858	-		Rru_A2312	0.11	+0.5
2,675,858	-		Rru_A2312	0.11	+0.6
2,675,957	+		Rru_A2312	0.16	-0.0
2,675,958	-		Rru_A2312	0.16	-0.0
2,675,958	-		Rru_A2312	0.16	+0.7
2,675,959	+		Rru_A2312	0.16	-0.0
2,676,078	-		Rru_A2312	0.21	+0.0
2,676,086	+		Rru_A2312	0.22	+0.3
2,676,086	+		Rru_A2312	0.22	-0.6
2,676,089	+		Rru_A2312	0.22	+0.2
2,676,095	+		Rru_A2312	0.22	-0.2
2,676,096	-		Rru_A2312	0.22	+1.4
2,676,206	-		Rru_A2312	0.27	+1.0
2,676,239	+		Rru_A2312	0.29	+0.3
2,676,239	+		Rru_A2312	0.29	-0.0
2,676,239	+		Rru_A2312	0.29	+0.6
2,676,261	-		Rru_A2312	0.30	-0.0
2,676,261	-		Rru_A2312	0.30	-0.0
2,676,261	-		Rru_A2312	0.30	-1.0
2,676,482	+		Rru_A2312	0.40	-1.0
2,676,482	+		Rru_A2312	0.40	+0.3
2,676,482	+		Rru_A2312	0.40	+0.2
2,676,482	+		Rru_A2312	0.40	+0.4
2,676,482	+		Rru_A2312	0.40	+1.6
2,676,482	+		Rru_A2312	0.40	-0.0
2,676,483	-		Rru_A2312	0.40	+0.6
2,676,483	-		Rru_A2312	0.40	+0.1
2,676,483	-		Rru_A2312	0.40	-0.0
2,676,483	-		Rru_A2312	0.40	+1.0
2,676,611	+		Rru_A2312	0.46	+1.2
2,676,612	-		Rru_A2312	0.46	-0.0
2,676,612	-		Rru_A2312	0.46	-0.0
2,676,629	-		Rru_A2312	0.47	-0.0
2,676,653	+		Rru_A2312	0.48	+0.0
2,676,791	+		Rru_A2312	0.54	-0.3
2,676,791	+		Rru_A2312	0.54	-0.7
2,676,792	-		Rru_A2312	0.54	+0.6
2,676,971	+		Rru_A2312	0.63	+0.3
2,676,992	+		Rru_A2312	0.64	+0.3
2,677,037	+		Rru_A2312	0.66	+0.8
2,677,038	-		Rru_A2312	0.66	+0.3
2,677,038	-		Rru_A2312	0.66	+0.1
2,677,087	+		Rru_A2312	0.68	-1.0
2,677,088	-		Rru_A2312	0.68	-0.1
2,677,088	-		Rru_A2312	0.68	+1.0
2,677,128	-		Rru_A2312	0.70	-0.0
2,677,128	-		Rru_A2312	0.70	-0.2
2,677,160	+		Rru_A2312	0.72	+0.4
2,677,160	+		Rru_A2312	0.72	-0.0
2,677,161	-		Rru_A2312	0.72	-0.5
2,677,262	+		Rru_A2312	0.76	-0.6
2,677,262	+		Rru_A2312	0.76	-0.4
2,677,263	-		Rru_A2312	0.76	-1.0
2,677,281	-		Rru_A2312	0.77	+0.4
2,677,320	-		Rru_A2312	0.79	+0.6
2,677,320	-		Rru_A2312	0.79	-0.0
2,677,320	-		Rru_A2312	0.79	-0.0
2,677,320	-		Rru_A2312	0.79	-0.0
2,677,343	+		Rru_A2312	0.80	+0.3
2,677,473	+		Rru_A2312	0.86	-0.0
2,677,473	+		Rru_A2312	0.86	-0.1
2,677,545	-		Rru_A2312	0.89	-0.0
2,677,547	+		Rru_A2312	0.89	-0.5
2,677,685	+				-0.0
2,677,691	+				-0.0
2,677,691	+				-0.0
2,677,691	+				+0.6
2,677,692	-				-0.0
2,677,692	-				-0.0
2,677,692	-				-0.6
2,677,692	-				+0.7
2,677,726	+				+0.6
2,677,726	+				-1.1
2,677,727	-				+0.2
2,677,772	+				+0.6
2,677,772	+				-0.0
2,677,773	-				+0.6
2,677,773	-				+0.2
2,677,773	-				+0.3
2,677,773	-				-1.0
2,677,862	+				-0.1
2,677,863	-				+0.5
2,677,937	+		Rru_A2313	0.15	-0.0
2,677,937	+		Rru_A2313	0.15	+0.9
2,677,938	-		Rru_A2313	0.15	+0.1
2,677,945	+		Rru_A2313	0.17	-0.0
2,677,945	+		Rru_A2313	0.17	+0.3
2,677,946	-		Rru_A2313	0.17	-0.0
2,677,946	-		Rru_A2313	0.17	-0.0
2,677,946	-		Rru_A2313	0.17	-0.0
2,678,122	+		Rru_A2313	0.70	-0.0
2,678,123	-		Rru_A2313	0.70	-0.0
2,678,512	-				+0.3
2,678,512	-				-1.0
2,678,512	-				-0.0
2,678,544	+				-0.0
2,678,544	+				-0.0
2,678,544	+				-0.0
2,678,545	-				+0.9
2,678,604	+				+1.0