Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2305

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,665,982	+				+0.1
2,665,984	+				+1.4
2,666,059	+				-0.0
2,666,059	+				+0.6
2,666,067	+				+0.2
2,666,067	+				-0.0
2,666,948	+				+0.4
2,666,948	+				-0.3
2,666,949	-				-0.0
2,666,950	+				-0.0
2,666,950	+				-0.0
2,666,950	+				+0.4
2,666,951	-				-0.0
2,666,951	-				-0.0
2,666,951	-				-0.0
2,666,951	-				-0.0
2,666,951	-				-0.0
2,666,951	-				-0.0
2,667,004	+				-2.0
2,667,005	-				-1.4
2,667,005	-				-1.0
2,667,095	+		Rru_A2305	0.18	+2.8
2,667,096	-		Rru_A2305	0.18	-0.0
2,667,216	+		Rru_A2305	0.33	-0.0
2,667,217	-		Rru_A2305	0.33	-0.0
2,667,222	+		Rru_A2305	0.33	-0.0
2,667,350	+		Rru_A2305	0.49	-1.4
2,667,409	+		Rru_A2305	0.57	+0.8
2,667,409	+		Rru_A2305	0.57	-0.0
2,667,410	-		Rru_A2305	0.57	-0.0
2,667,486	+		Rru_A2305	0.66	+0.2
2,667,486	+		Rru_A2305	0.66	-0.0
2,667,486	+		Rru_A2305	0.66	-0.0
2,667,486	+		Rru_A2305	0.66	+0.5
2,667,486	+		Rru_A2305	0.66	-0.6
2,667,486	+		Rru_A2305	0.66	+0.1
2,667,486	+		Rru_A2305	0.66	-0.6
2,667,486	+		Rru_A2305	0.66	+0.3
2,667,487	-		Rru_A2305	0.66	-0.0
2,667,487	-		Rru_A2305	0.66	-0.3
2,667,487	-		Rru_A2305	0.66	-0.0
2,667,516	+		Rru_A2305	0.70	-0.0
2,667,516	+		Rru_A2305	0.70	-0.1
2,667,516	+		Rru_A2305	0.70	-0.0
2,667,517	-		Rru_A2305	0.70	+1.5
2,667,517	-		Rru_A2305	0.70	+0.6
2,667,637	-		Rru_A2305	0.85	-0.0
2,667,809	-				-0.0
2,667,809	-				-0.0
2,667,928	-				+1.1
2,668,122	+				-0.7
2,668,197	+				-0.0
2,668,198	-				+0.7
2,668,198	-				+0.5
2,668,236	-				-0.0
2,668,236	-				+0.1
2,668,237	+				+0.6
2,668,237	+				-0.0
2,668,237	+				-0.0
2,668,238	-				+0.6
2,668,238	-				+1.0
2,668,238	-				+1.0
2,668,272	+				+0.8
2,668,273	-				+2.0
2,668,347	+				-0.0
2,668,348	-				+0.5
2,668,348	-				+0.4
2,668,388	+				-0.0
2,668,422	+				-0.3
2,668,423	-				-0.0
2,668,423	-				-0.0
2,668,423	-				-0.0
2,668,496	-				-0.0
2,668,496	-				+0.6
2,668,496	-				-0.0
2,668,571	+				+1.5
2,668,572	-				+0.7
2,668,572	-				+0.1
2,668,572	-				-0.0
2,668,572	-				+0.8
2,668,647	+				+0.0
2,668,647	+				-1.3
2,668,647	+				-0.0
2,668,722	+				+1.2
2,668,722	+				+2.0
2,668,723	-				-0.0
2,668,723	-				-0.0