Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2266

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,625,670	-		Rru_A2265	0.34	-0.0
2,625,845	-		Rru_A2265	0.47	-0.3
2,625,845	-		Rru_A2265	0.47	-1.0
2,625,846	+		Rru_A2265	0.47	-0.0
2,626,071	+		Rru_A2265	0.65	-0.0
2,626,071	+		Rru_A2265	0.65	-0.8
2,626,072	-		Rru_A2265	0.65	-0.3
2,626,072	-		Rru_A2265	0.65	-1.0
2,626,072	-		Rru_A2265	0.65	-0.0
2,626,227	+		Rru_A2265	0.77	-0.0
2,626,228	-		Rru_A2265	0.77	-0.0
2,626,228	-		Rru_A2265	0.77	-1.0
2,626,281	+		Rru_A2265	0.81	-2.0
2,626,281	+		Rru_A2265	0.81	-1.4
2,626,281	+		Rru_A2265	0.81	-2.7
2,626,281	+		Rru_A2265	0.81	-3.7
2,626,282	-		Rru_A2265	0.81	-0.0
2,626,282	-		Rru_A2265	0.81	-2.4
2,626,282	-		Rru_A2265	0.81	-3.0
2,626,282	-		Rru_A2265	0.81	-1.6
2,626,282	-		Rru_A2265	0.81	+1.0
2,626,383	+		Rru_A2265	0.89	-0.0
2,626,384	-		Rru_A2265	0.89	-0.0
2,626,470	+				-0.0
2,626,470	+				-2.4
2,626,471	-				-1.6
2,626,471	-				-1.3
2,626,471	-				-0.0
2,626,511	+				-0.0
2,626,511	+				-0.9
2,626,511	+				-0.0
2,626,511	+				-1.3
2,626,511	+				-2.0
2,626,511	+				-1.4
2,626,512	-				-0.9
2,626,512	-				-1.3
2,626,512	-				-2.0
2,626,512	-				-0.0
2,626,512	-				-0.9
2,626,512	-				-1.9
2,626,675	+		Rru_A2266	0.11	-0.0
2,626,675	+		Rru_A2266	0.11	-2.3
2,626,693	+		Rru_A2266	0.13	-0.0
2,626,751	-		Rru_A2266	0.18	-0.8
2,626,752	+		Rru_A2266	0.18	-1.0
2,626,752	+		Rru_A2266	0.18	-1.6
2,626,752	+		Rru_A2266	0.18	-1.3
2,626,752	+		Rru_A2266	0.18	-0.0
2,626,752	+		Rru_A2266	0.18	-0.0
2,626,752	+		Rru_A2266	0.18	-2.8
2,626,753	-		Rru_A2266	0.18	-1.9
2,626,753	-		Rru_A2266	0.18	-0.0
2,626,753	-		Rru_A2266	0.18	-0.0
2,626,753	-		Rru_A2266	0.18	-2.4
2,626,753	-		Rru_A2266	0.18	-0.0
2,626,753	-		Rru_A2266	0.18	-1.2
2,626,753	-		Rru_A2266	0.18	-1.0
2,626,753	-		Rru_A2266	0.18	+0.2
2,626,753	-		Rru_A2266	0.18	-0.0
2,626,753	-		Rru_A2266	0.18	-1.6
2,626,753	-		Rru_A2266	0.18	-0.0
2,626,753	-		Rru_A2266	0.18	-0.9
2,626,842	+		Rru_A2266	0.27	-1.8
2,626,842	+		Rru_A2266	0.27	-0.8
2,626,843	-		Rru_A2266	0.27	-1.1
2,626,843	-		Rru_A2266	0.27	-1.7
2,626,936	-		Rru_A2266	0.35	+0.6
2,626,936	-		Rru_A2266	0.35	-1.1
2,626,964	-		Rru_A2266	0.38	-1.7
2,627,125	+		Rru_A2266	0.52	-3.3
2,627,125	+		Rru_A2266	0.52	-0.0
2,627,126	-		Rru_A2266	0.52	-1.8
2,627,293	+		Rru_A2266	0.68	-2.1
2,627,293	+		Rru_A2266	0.68	-0.2
2,627,293	+		Rru_A2266	0.68	-0.0
2,627,293	+		Rru_A2266	0.68	-0.0
2,627,294	-		Rru_A2266	0.68	-2.0
2,627,294	-		Rru_A2266	0.68	-0.0
2,627,294	-		Rru_A2266	0.68	-0.8
2,627,329	-		Rru_A2266	0.71	-1.6
2,627,373	+		Rru_A2266	0.75	-0.0
2,627,373	+		Rru_A2266	0.75	-3.8
2,627,373	+		Rru_A2266	0.75	+0.6
2,627,373	+		Rru_A2266	0.75	-0.0
2,627,391	+		Rru_A2266	0.77	-1.8
2,627,391	+		Rru_A2266	0.77	-0.0
2,627,391	+		Rru_A2266	0.77	-1.9
2,627,391	+		Rru_A2266	0.77	-2.1
2,627,392	-		Rru_A2266	0.77	-0.0
2,627,392	-		Rru_A2266	0.77	-2.4
2,627,419	+		Rru_A2266	0.79	-0.0
2,627,563	+				-0.0
2,627,564	-				-0.7
2,627,564	-				-0.0
2,627,564	-				-1.7
2,627,565	+				-0.8
2,627,565	+				-1.0
2,627,565	+				-1.0
2,627,665	+				-0.0
2,627,665	+				-1.4
2,627,997	+		Rru_A2267	0.39	-0.0
2,627,997	+		Rru_A2267	0.39	-0.9
2,627,997	+		Rru_A2267	0.39	-0.5
2,627,997	+		Rru_A2267	0.39	+0.9
2,627,998	-		Rru_A2267	0.39	-2.5
2,628,079	+		Rru_A2267	0.49	-4.3
2,628,079	+		Rru_A2267	0.49	-0.0
2,628,079	+		Rru_A2267	0.49	-2.0
2,628,079	+		Rru_A2267	0.49	-0.6
2,628,080	-		Rru_A2267	0.49	-0.0
2,628,080	-		Rru_A2267	0.49	-1.5
2,628,080	-		Rru_A2267	0.49	-0.0
2,628,080	-		Rru_A2267	0.49	-0.0
2,628,080	-		Rru_A2267	0.49	-0.0
2,628,220	+		Rru_A2267	0.65	-0.0
2,628,220	+		Rru_A2267	0.65	-0.0
2,628,220	+		Rru_A2267	0.65	-3.0
2,628,220	+		Rru_A2267	0.65	+1.0
2,628,221	-		Rru_A2267	0.65	-0.0
2,628,221	-		Rru_A2267	0.65	-1.6
2,628,221	-		Rru_A2267	0.65	-0.0
2,628,221	-		Rru_A2267	0.65	-0.0
2,628,406	+		Rru_A2267	0.87	-2.4
2,628,407	-		Rru_A2267	0.87	-1.2
2,628,509	+				-0.0
2,628,510	-				-2.9
2,628,510	-				-1.0
2,628,510	-				-2.4
2,628,600	+				+0.1
2,628,601	-				+0.6
2,628,641	-				+1.2
2,628,641	-				+1.6
2,628,641	-				+2.1
2,628,642	+				-1.3
2,628,643	-				+1.8