Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2251

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,612,601	+				-0.0
2,612,602	-				+0.0
2,612,602	-				-0.0
2,612,679	+				-0.0
2,612,679	+				-0.0
2,612,680	-				-0.0
2,612,680	-				+0.6
2,612,680	-				+0.8
2,612,680	-				-0.0
2,612,680	-				+0.3
2,612,680	-				-0.0
2,612,680	-				+0.3
2,612,680	-				-0.2
2,612,680	-				+0.3
2,612,680	-				-0.0
2,612,680	-				+0.5
2,612,680	-				+0.4
2,612,681	+				+0.0
2,612,681	+				-0.0
2,612,682	-				+0.7
2,612,682	-				-0.6
2,612,738	+				+0.2
2,612,739	-				-0.2
2,612,739	-				+0.2
2,612,777	+				+0.0
2,612,777	+				-0.0
2,612,778	-				+1.0
2,612,778	-				-0.0
2,612,778	-				+0.6
2,612,778	-				-0.0
2,613,358	+		Rru_A2250	0.84	+0.2
2,613,358	+		Rru_A2250	0.84	-0.0
2,613,358	+		Rru_A2250	0.84	-0.0
2,613,358	+		Rru_A2250	0.84	+0.8
2,613,359	-		Rru_A2250	0.84	+1.1
2,613,477	+				-0.2
2,613,478	-				-0.0
2,613,864	+		Rru_A2251	0.36	+0.4
2,613,865	-		Rru_A2251	0.36	+0.7
2,613,865	-		Rru_A2251	0.36	-0.0
2,613,933	+		Rru_A2251	0.45	-0.5
2,613,934	-		Rru_A2251	0.45	-0.0
2,613,934	-		Rru_A2251	0.45	-0.0
2,613,936	+		Rru_A2251	0.45	+0.8
2,613,936	+		Rru_A2251	0.45	-1.0
2,613,936	+		Rru_A2251	0.45	-1.0
2,613,937	-		Rru_A2251	0.45	-2.0
2,613,937	-		Rru_A2251	0.45	+0.5
2,613,937	-		Rru_A2251	0.45	+1.0
2,613,937	-		Rru_A2251	0.45	+1.0
2,613,937	-		Rru_A2251	0.45	+0.6
2,613,937	-		Rru_A2251	0.45	-0.0
2,613,938	+		Rru_A2251	0.45	-0.1
2,613,938	+		Rru_A2251	0.45	+0.8
2,613,938	+		Rru_A2251	0.45	-0.6
2,613,938	+		Rru_A2251	0.45	+0.6
2,613,939	-		Rru_A2251	0.45	-0.0
2,613,939	-		Rru_A2251	0.45	+0.9
2,613,939	-		Rru_A2251	0.45	+0.5
2,613,939	-		Rru_A2251	0.45	-0.0
2,613,939	-		Rru_A2251	0.45	-0.0
2,613,939	-		Rru_A2251	0.45	+0.9
2,614,089	+		Rru_A2251	0.64	-0.0
2,614,089	+		Rru_A2251	0.64	+0.0
2,614,090	-		Rru_A2251	0.65	+1.0
2,614,110	+		Rru_A2251	0.67	+1.1
2,614,110	+		Rru_A2251	0.67	-0.0
2,614,111	-		Rru_A2251	0.67	-0.0
2,614,158	+		Rru_A2251	0.73	-0.0
2,614,158	+		Rru_A2251	0.73	+1.1
2,614,158	+		Rru_A2251	0.73	+0.8
2,614,158	+		Rru_A2251	0.73	+1.2
2,614,158	+		Rru_A2251	0.73	+2.2
2,614,158	+		Rru_A2251	0.73	+0.4
2,614,158	+		Rru_A2251	0.73	+1.8
2,614,158	+		Rru_A2251	0.73	+0.2
2,614,159	-		Rru_A2251	0.73	+0.8
2,614,159	-		Rru_A2251	0.73	-0.2
2,614,159	-		Rru_A2251	0.73	-0.0
2,614,159	-		Rru_A2251	0.73	+0.0
2,614,167	+		Rru_A2251	0.74	-0.0
2,614,167	+		Rru_A2251	0.74	-0.0
2,614,167	+		Rru_A2251	0.74	-0.0
2,614,168	-		Rru_A2251	0.74	-0.4
2,614,168	-		Rru_A2251	0.74	-0.0
2,614,200	+		Rru_A2251	0.78	+1.7
2,614,201	-		Rru_A2251	0.79	-0.0
2,614,201	-		Rru_A2251	0.79	+0.7
2,614,201	-		Rru_A2251	0.79	+1.1
2,614,323	+				+0.5
2,614,323	+				+1.0
2,614,323	+				+3.0
2,614,324	-				-0.0
2,614,324	-				+0.9
2,614,324	-				+0.4
2,614,324	-				+0.2
2,614,324	-				-0.0
2,614,344	+				-0.0
2,614,344	+				-0.0
2,614,344	+				-0.0
2,614,345	-				-1.0
2,614,345	-				-0.2
2,614,368	+				+0.9
2,614,368	+				-1.6
2,614,369	-				-1.0
2,614,380	+				-0.0
2,614,380	+				+0.7
2,614,434	+				+0.5
2,614,435	-				-1.4
2,614,435	-				+0.8
2,614,495	-				+0.8
2,614,654	+		Rru_A2252	0.22	+0.8
2,614,654	+		Rru_A2252	0.22	+0.8
2,614,655	-		Rru_A2252	0.22	-0.0
2,614,655	-		Rru_A2252	0.22	+0.7
2,614,655	-		Rru_A2252	0.22	-0.0
2,614,705	+		Rru_A2252	0.30	-1.6
2,614,705	+		Rru_A2252	0.30	+0.9
2,614,705	+		Rru_A2252	0.30	+0.8
2,614,705	+		Rru_A2252	0.30	-0.0
2,614,705	+		Rru_A2252	0.30	+0.7
2,614,705	+		Rru_A2252	0.30	+0.7
2,614,705	+		Rru_A2252	0.30	-0.0
2,614,705	+		Rru_A2252	0.30	+1.0
2,614,705	+		Rru_A2252	0.30	-0.0
2,614,705	+		Rru_A2252	0.30	+0.2
2,614,706	-		Rru_A2252	0.30	-0.0
2,614,706	-		Rru_A2252	0.30	-0.0
2,614,706	-		Rru_A2252	0.30	+0.0
2,614,708	+		Rru_A2252	0.30	-1.0
2,614,709	-		Rru_A2252	0.30	-0.0
2,614,783	+		Rru_A2252	0.41	-0.0
2,614,783	+		Rru_A2252	0.41	-0.0
2,614,783	+		Rru_A2252	0.41	-0.0
2,614,825	+		Rru_A2252	0.47	+0.6
2,614,825	+		Rru_A2252	0.47	-0.0
2,614,826	-		Rru_A2252	0.47	-1.0
2,614,918	+		Rru_A2252	0.60	+0.5
2,614,918	+		Rru_A2252	0.60	-0.0
2,614,919	-		Rru_A2252	0.60	+0.3
2,614,919	-		Rru_A2252	0.60	-0.0
2,615,074	+		Rru_A2252	0.82	-0.0
2,615,074	+		Rru_A2252	0.82	-0.0
2,615,075	-		Rru_A2252	0.83	-0.3
2,615,075	-		Rru_A2252	0.83	+0.2
2,615,075	-		Rru_A2252	0.83	-0.2
2,615,075	-		Rru_A2252	0.83	+0.7
2,615,075	-		Rru_A2252	0.83	+0.3
2,615,107	+		Rru_A2252	0.87	+0.4
2,615,107	+		Rru_A2252	0.87	+0.5
2,615,108	-		Rru_A2252	0.87	+0.6