Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2249

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,610,574	-				+0.9
2,610,574	-				-0.0
2,610,672	+		Rru_A2248	0.27	-1.0
2,610,673	-		Rru_A2248	0.27	-0.0
2,610,673	-		Rru_A2248	0.27	+1.7
2,610,673	-		Rru_A2248	0.27	-0.9
2,610,673	-		Rru_A2248	0.27	-0.0
2,610,912	+		Rru_A2248	0.70	-0.0
2,610,932	+		Rru_A2248	0.73	-0.0
2,610,932	+		Rru_A2248	0.73	-0.0
2,610,932	+		Rru_A2248	0.73	+0.7
2,610,933	-		Rru_A2248	0.73	+0.6
2,610,933	-		Rru_A2248	0.73	+0.5
2,610,936	+		Rru_A2248	0.74	-0.0
2,610,937	-		Rru_A2248	0.74	+1.1
2,610,990	+		Rru_A2248	0.84	+0.3
2,610,991	-		Rru_A2248	0.84	-0.2
2,610,991	-		Rru_A2248	0.84	-0.0
2,610,991	-		Rru_A2248	0.84	-0.0
2,611,132	+				+0.5
2,611,205	+				+1.3
2,611,206	-				+0.2
2,611,206	-				-0.2
2,611,370	+				-0.0
2,611,370	+				+0.4
2,611,370	+				-0.2
2,611,370	+				-0.0
2,611,370	+				-0.0
2,611,370	+				-0.0
2,611,370	+				+0.5
2,611,371	-				-0.0
2,611,523	-		Rru_A2249	0.11	-0.0
2,611,523	-		Rru_A2249	0.11	+1.3
2,611,523	-		Rru_A2249	0.11	+1.3
2,611,629	-		Rru_A2249	0.21	+0.8
2,611,940	+		Rru_A2249	0.51	+1.1
2,611,940	+		Rru_A2249	0.51	+1.1
2,611,941	-		Rru_A2249	0.51	-0.6
2,611,941	-		Rru_A2249	0.51	-0.0
2,612,002	+		Rru_A2249	0.57	-0.0
2,612,002	+		Rru_A2249	0.57	+2.6
2,612,221	+		Rru_A2249	0.78	-0.0
2,612,222	-		Rru_A2249	0.78	+0.6
2,612,222	-		Rru_A2249	0.78	+0.7
2,612,222	-		Rru_A2249	0.78	+0.8
2,612,222	-		Rru_A2249	0.78	-0.0
2,612,366	-				-0.0
2,612,366	-				-0.0
2,612,558	-				+0.5
2,612,601	+				-0.0
2,612,602	-				+0.0
2,612,602	-				-0.0
2,612,679	+				-0.0
2,612,679	+				-0.0
2,612,680	-				-0.0
2,612,680	-				+0.6
2,612,680	-				+0.8
2,612,680	-				-0.0
2,612,680	-				+0.3
2,612,680	-				-0.0
2,612,680	-				+0.3
2,612,680	-				-0.2
2,612,680	-				+0.3
2,612,680	-				-0.0
2,612,680	-				+0.5
2,612,680	-				+0.4
2,612,681	+				+0.0
2,612,681	+				-0.0
2,612,682	-				+0.7
2,612,682	-				-0.6
2,612,738	+				+0.2
2,612,739	-				-0.2
2,612,739	-				+0.2
2,612,777	+				+0.0
2,612,777	+				-0.0
2,612,778	-				+1.0
2,612,778	-				-0.0
2,612,778	-				+0.6
2,612,778	-				-0.0
2,613,358	+		Rru_A2250	0.84	+0.2
2,613,358	+		Rru_A2250	0.84	-0.0
2,613,358	+		Rru_A2250	0.84	-0.0
2,613,358	+		Rru_A2250	0.84	+0.8
2,613,359	-		Rru_A2250	0.84	+1.1