Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2247

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,608,660	+		Rru_A2246	0.41	-0.2
2,608,774	+		Rru_A2246	0.50	-0.0
2,608,774	+		Rru_A2246	0.50	-0.4
2,608,774	+		Rru_A2246	0.50	-0.0
2,608,774	+		Rru_A2246	0.50	-0.7
2,608,774	+		Rru_A2246	0.50	-0.0
2,608,774	+		Rru_A2246	0.50	-0.0
2,608,774	+		Rru_A2246	0.50	-0.0
2,608,774	+		Rru_A2246	0.50	-1.2
2,608,774	+		Rru_A2246	0.50	-0.1
2,608,774	+		Rru_A2246	0.50	-0.0
2,608,774	+		Rru_A2246	0.50	-0.0
2,608,775	-		Rru_A2246	0.50	+0.1
2,608,775	-		Rru_A2246	0.50	-0.9
2,608,775	-		Rru_A2246	0.50	-0.0
2,608,775	-		Rru_A2246	0.50	-0.0
2,608,775	-		Rru_A2246	0.50	+0.2
2,608,775	-		Rru_A2246	0.50	-0.0
2,608,775	-		Rru_A2246	0.50	-1.4
2,608,775	-		Rru_A2246	0.50	-0.2
2,608,775	-		Rru_A2246	0.50	-0.0
2,608,775	-		Rru_A2246	0.50	-0.0
2,608,775	-		Rru_A2246	0.50	-2.4
2,608,921	+		Rru_A2246	0.62	-0.0
2,608,922	-		Rru_A2246	0.62	-1.1
2,608,922	-		Rru_A2246	0.62	-0.0
2,608,922	-		Rru_A2246	0.62	-1.4
2,608,945	+		Rru_A2246	0.64	-0.0
2,608,945	+		Rru_A2246	0.64	+0.6
2,608,945	+		Rru_A2246	0.64	-0.4
2,608,945	+		Rru_A2246	0.64	-0.0
2,608,975	+		Rru_A2246	0.66	+0.3
2,608,990	-		Rru_A2246	0.67	+0.6
2,609,026	+		Rru_A2246	0.70	+0.3
2,609,027	-		Rru_A2246	0.70	-0.6
2,609,027	-		Rru_A2246	0.70	-1.6
2,609,053	+		Rru_A2246	0.72	+0.6
2,609,054	-		Rru_A2246	0.72	-0.0
2,609,054	-		Rru_A2246	0.72	-0.8
2,609,054	-		Rru_A2246	0.72	-0.0
2,609,054	-		Rru_A2246	0.72	-0.0
2,609,054	-		Rru_A2246	0.72	-0.6
2,609,203	+		Rru_A2246	0.84	+0.6
2,609,205	+		Rru_A2246	0.84	+0.8
2,609,206	-		Rru_A2246	0.84	-1.0
2,609,206	-		Rru_A2246	0.84	-0.5
2,609,206	-		Rru_A2246	0.84	-0.0
2,609,206	-		Rru_A2246	0.84	+0.8
2,609,220	+		Rru_A2246	0.85	+0.2
2,609,404	+				-0.0
2,609,404	+				-0.0
2,609,409	+				-0.0
2,609,456	+				+0.7
2,609,475	+				-0.0
2,609,548	-				+0.6
2,609,548	-				+0.3
2,609,626	+				-1.0
2,609,627	-				-0.0
2,609,627	-				+0.1
2,609,627	-				-1.0
2,609,627	-				+0.2
2,609,627	-				-0.0
2,609,636	-				+0.3
2,609,704	+		Rru_A2247	0.21	-0.0
2,609,705	-		Rru_A2247	0.21	-0.0
2,609,705	-		Rru_A2247	0.21	+1.2
2,609,705	-		Rru_A2247	0.21	+0.9
2,609,705	-		Rru_A2247	0.21	+0.7
2,609,705	-		Rru_A2247	0.21	+1.2
2,609,744	-		Rru_A2247	0.29	-0.0
2,609,744	-		Rru_A2247	0.29	+0.4
2,609,800	+		Rru_A2247	0.41	-0.2
2,609,938	+		Rru_A2247	0.68	+0.9
2,609,939	-		Rru_A2247	0.68	-0.9
2,609,952	+		Rru_A2247	0.71	+0.6
2,610,085	+				-0.0
2,610,086	-				+0.4
2,610,086	-				+0.2
2,610,096	-				-0.0
2,610,123	+				+0.6
2,610,123	+				-0.0
2,610,123	+				-1.0
2,610,123	+				-0.2
2,610,124	-				-0.0
2,610,229	+				-0.0
2,610,229	+				+0.4
2,610,380	+				-0.0
2,610,380	+				+1.0
2,610,380	+				-0.0
2,610,380	+				-0.1
2,610,381	-				-0.7
2,610,381	-				+0.6
2,610,381	-				-0.0
2,610,398	+				-0.0
2,610,399	-				+0.4
2,610,399	-				-0.1
2,610,574	-				+0.9
2,610,574	-				-0.0
2,610,672	+		Rru_A2248	0.27	-1.0
2,610,673	-		Rru_A2248	0.27	-0.0
2,610,673	-		Rru_A2248	0.27	+1.7
2,610,673	-		Rru_A2248	0.27	-0.9
2,610,673	-		Rru_A2248	0.27	-0.0
2,610,912	+		Rru_A2248	0.70	-0.0
2,610,932	+		Rru_A2248	0.73	-0.0
2,610,932	+		Rru_A2248	0.73	-0.0
2,610,932	+		Rru_A2248	0.73	+0.7
2,610,933	-		Rru_A2248	0.73	+0.6
2,610,933	-		Rru_A2248	0.73	+0.5
2,610,936	+		Rru_A2248	0.74	-0.0
2,610,937	-		Rru_A2248	0.74	+1.1
2,610,990	+		Rru_A2248	0.84	+0.3
2,610,991	-		Rru_A2248	0.84	-0.2
2,610,991	-		Rru_A2248	0.84	-0.0
2,610,991	-		Rru_A2248	0.84	-0.0