Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2198

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,551,304	+				+0.9
2,551,304	+				-0.0
2,551,305	-				-1.6
2,551,305	-				-0.1
2,551,305	-				-0.0
2,551,305	-				-0.0
2,551,306	+				+1.0
2,551,306	+				-0.0
2,551,306	+				+0.7
2,551,306	+				-1.6
2,551,307	-				+0.7
2,551,307	-				+0.2
2,551,464	-				-0.0
2,551,464	-				+0.4
2,551,614	+		Rru_A2197	0.21	-0.1
2,551,615	-		Rru_A2197	0.21	+0.4
2,551,615	-		Rru_A2197	0.21	-0.0
2,551,615	-		Rru_A2197	0.21	+0.9
2,551,615	-		Rru_A2197	0.21	-0.0
2,552,200	+				-0.7
2,552,222	-				+1.2
2,552,232	+				-0.0
2,552,233	-				-0.4
2,552,233	-				+1.2
2,552,285	-				+1.0
2,552,323	+				+0.7
2,552,323	+				-0.0
2,552,323	+				-0.4
2,552,323	+				+0.9
2,552,324	-				+0.9
2,552,324	-				+1.2
2,552,324	-				+1.0
2,552,324	-				-0.0
2,552,324	-				+0.4
2,552,324	-				-0.0
2,552,324	-				+1.4
2,552,326	+				-0.0
2,552,326	+				-0.0
2,552,327	-				-0.0
2,552,539	+		Rru_A2198	0.52	-0.4
2,552,539	+		Rru_A2198	0.52	+0.9
2,552,539	+		Rru_A2198	0.52	+1.0
2,552,540	-		Rru_A2198	0.52	-0.0
2,552,699	+		Rru_A2198	0.85	+0.3
2,552,820	-				+0.1
2,552,906	-				-0.0
2,553,373	+		Rru_A2199	0.29	+0.2
2,553,373	+		Rru_A2199	0.29	-0.0
2,553,374	-		Rru_A2199	0.29	-1.0