Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2193

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,547,194	+		Rru_A2192	0.62	-0.0
2,547,194	+		Rru_A2192	0.62	+1.1
2,547,195	-		Rru_A2192	0.62	-0.0
2,547,195	-		Rru_A2192	0.62	-0.0
2,547,195	-		Rru_A2192	0.62	-0.0
2,547,195	-		Rru_A2192	0.62	+0.5
2,547,195	-		Rru_A2192	0.62	-0.0
2,547,608	+		Rru_A2192	0.85	+1.0
2,547,608	+		Rru_A2192	0.85	+1.1
2,547,608	+		Rru_A2192	0.85	-0.0
2,547,608	+		Rru_A2192	0.85	-0.0
2,547,608	+		Rru_A2192	0.85	-0.0
2,547,608	+		Rru_A2192	0.85	+1.1
2,547,608	+		Rru_A2192	0.85	-0.0
2,547,608	+		Rru_A2192	0.85	+1.6
2,547,608	+		Rru_A2192	0.85	+1.3
2,547,609	-		Rru_A2192	0.85	-0.0
2,547,609	-		Rru_A2192	0.85	-1.6
2,547,609	-		Rru_A2192	0.85	-0.0
2,547,609	-		Rru_A2192	0.85	-3.0
2,547,609	-		Rru_A2192	0.85	-2.5
2,547,609	-		Rru_A2192	0.85	+0.2
2,547,609	-		Rru_A2192	0.85	-2.2
2,547,609	-		Rru_A2192	0.85	-0.0
2,547,609	-		Rru_A2192	0.85	-2.2
2,547,609	-		Rru_A2192	0.85	-0.0
2,547,609	-		Rru_A2192	0.85	-1.0
2,547,609	-		Rru_A2192	0.85	-1.0
2,547,609	-		Rru_A2192	0.85	-0.8
2,547,611	-		Rru_A2192	0.85	-0.0
2,547,639	-		Rru_A2192	0.87	-0.0
2,547,639	-		Rru_A2192	0.87	-1.4
2,547,644	+		Rru_A2192	0.87	+1.9
2,547,644	+		Rru_A2192	0.87	+0.7
2,547,644	+		Rru_A2192	0.87	-0.0
2,547,645	-		Rru_A2192	0.87	-0.0
2,547,650	+		Rru_A2192	0.87	-0.0
2,547,728	+				-0.0
2,547,728	+				-0.0
2,547,729	-				-1.6
2,547,737	-				-0.0
2,547,949	+				+2.0
2,547,949	+				+1.3
2,547,949	+				+0.8
2,547,949	+				+1.9
2,547,949	+				-0.0
2,547,949	+				+1.7
2,547,950	-				-0.0
2,547,969	-				-0.0
2,547,981	+				-0.8
2,547,981	+				-0.0
2,547,982	-				-2.1
2,547,982	-				-1.0
2,547,982	-				-1.0
2,547,982	-				-2.7
2,547,989	+				+1.3
2,547,990	-				-1.0
2,548,036	+				-1.0
2,548,036	+				-0.0
2,548,036	+				-0.0
2,548,037	-				-1.0
2,548,077	-				-0.4
2,548,133	+				-0.0
2,548,133	+				-0.0
2,548,134	-				-3.7
2,548,134	-				+0.3
2,548,467	-		Rru_A2193	0.32	-0.0
2,548,608	-		Rru_A2193	0.42	-0.6
2,548,645	+		Rru_A2193	0.45	-0.0
2,548,645	+		Rru_A2193	0.45	-0.0
2,548,645	+		Rru_A2193	0.45	+0.2
2,548,645	+		Rru_A2193	0.45	-1.0
2,548,645	+		Rru_A2193	0.45	-0.0
2,548,645	+		Rru_A2193	0.45	-4.8
2,548,646	-		Rru_A2193	0.45	-0.0
2,548,646	-		Rru_A2193	0.45	-1.4
2,548,790	+		Rru_A2193	0.55	-2.7
2,548,792	+		Rru_A2193	0.56	-2.0
2,548,792	+		Rru_A2193	0.56	-1.6
2,548,792	+		Rru_A2193	0.56	-1.5
2,548,792	+		Rru_A2193	0.56	-2.6
2,548,792	+		Rru_A2193	0.56	-1.2
2,548,793	-		Rru_A2193	0.56	-2.7
2,548,793	-		Rru_A2193	0.56	-1.8
2,548,793	-		Rru_A2193	0.56	-1.4
2,548,795	+		Rru_A2193	0.56	-0.0
2,548,795	+		Rru_A2193	0.56	-2.2
2,548,796	-		Rru_A2193	0.56	-2.0
2,548,796	-		Rru_A2193	0.56	-0.0
2,548,796	-		Rru_A2193	0.56	-1.6
2,548,811	+		Rru_A2193	0.57	-1.5
2,548,811	+		Rru_A2193	0.57	-0.0
2,548,812	-		Rru_A2193	0.57	-1.0
2,548,812	-		Rru_A2193	0.57	-1.6
2,548,812	-		Rru_A2193	0.57	-1.0
2,548,823	+		Rru_A2193	0.58	-0.0
2,548,823	+		Rru_A2193	0.58	-0.0
2,548,823	+		Rru_A2193	0.58	-0.0
2,548,824	-		Rru_A2193	0.58	-0.0
2,548,824	-		Rru_A2193	0.58	-0.0
2,548,824	-		Rru_A2193	0.58	-0.0
2,548,824	-		Rru_A2193	0.58	-2.4
2,548,824	-		Rru_A2193	0.58	-3.4
2,548,824	-		Rru_A2193	0.58	-2.8
2,548,826	-		Rru_A2193	0.58	-3.6
2,548,958	+		Rru_A2193	0.68	-0.0
2,549,075	+		Rru_A2193	0.76	-0.0
2,549,075	+		Rru_A2193	0.76	-2.2
2,549,075	+		Rru_A2193	0.76	-3.0
2,549,075	+		Rru_A2193	0.76	+1.6
2,549,076	-		Rru_A2193	0.76	-0.6
2,549,076	-		Rru_A2193	0.76	-2.2
2,549,076	-		Rru_A2193	0.76	-1.7
2,549,076	-		Rru_A2193	0.76	-1.0
2,549,107	+		Rru_A2193	0.79	-0.0
2,549,722	+		Rru_A2194	0.62	-1.0
2,549,722	+		Rru_A2194	0.62	+0.6
2,549,722	+		Rru_A2194	0.62	-0.0
2,549,722	+		Rru_A2194	0.62	-0.0
2,549,722	+		Rru_A2194	0.62	-0.0
2,549,722	+		Rru_A2194	0.62	+1.6
2,549,723	-		Rru_A2194	0.62	-0.4
2,549,723	-		Rru_A2194	0.62	+0.6
2,550,004	+				+1.5
2,550,040	+				+0.8
2,550,041	-				-0.8
2,550,041	-				+0.5
2,550,162	+				-0.0
2,550,162	+				+0.1
2,550,162	+				+0.4
2,550,162	+				-0.0
2,550,162	+				-0.0
2,550,210	+		Rru_A2195	0.17	+0.2
2,550,211	-		Rru_A2195	0.17	+0.5
2,550,211	-		Rru_A2195	0.17	-0.0
2,550,211	-		Rru_A2195	0.17	-0.0