Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2185

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,536,028	-				-0.0
2,536,040	-				+2.0
2,536,423	+		Rru_A2184	0.55	+0.2
2,536,423	+		Rru_A2184	0.55	-0.1
2,536,651	-				+1.2
2,536,794	+				+0.7
2,536,808	+				+0.1
2,536,850	+				+3.0
2,536,850	+				-0.2
2,536,850	+				+0.1
2,536,851	-				+0.0
2,536,851	-				-0.0
2,536,851	-				-0.0
2,536,851	-				-0.5
2,536,851	-				-0.0
2,536,914	+				+0.8
2,536,914	+				-0.0
2,536,914	+				-2.0
2,536,914	+				-1.4
2,536,915	-				-0.0
2,536,915	-				-0.0
2,536,915	-				-0.1
2,536,962	-				+1.2
2,537,065	-				-1.0
2,537,065	-				-0.0
2,537,065	-				+0.6
2,537,113	-				+0.6
2,537,364	+		Rru_A2185	0.13	+1.0
2,537,382	+		Rru_A2185	0.13	+0.2
2,537,382	+		Rru_A2185	0.13	-1.0
2,537,382	+		Rru_A2185	0.13	-0.0
2,537,383	-		Rru_A2185	0.13	+1.3
2,537,383	-		Rru_A2185	0.13	-0.0
2,537,383	-		Rru_A2185	0.13	-1.0
2,537,393	-		Rru_A2185	0.14	-0.0
2,537,394	+		Rru_A2185	0.14	-0.0
2,537,394	+		Rru_A2185	0.14	-0.0
2,537,395	-		Rru_A2185	0.14	+0.1
2,537,395	-		Rru_A2185	0.14	-0.0
2,537,413	-		Rru_A2185	0.14	+0.1
2,537,413	-		Rru_A2185	0.14	-0.0
2,537,764	-		Rru_A2185	0.24	-0.0
2,537,938	+		Rru_A2185	0.29	+0.3
2,537,938	+		Rru_A2185	0.29	+0.7
2,537,939	-		Rru_A2185	0.29	-1.3
2,538,234	+		Rru_A2185	0.38	-0.0
2,538,234	+		Rru_A2185	0.38	-0.0
2,538,366	+		Rru_A2185	0.41	+1.1
2,538,366	+		Rru_A2185	0.41	-0.0
2,538,367	-		Rru_A2185	0.41	-0.3
2,538,367	-		Rru_A2185	0.41	+0.0
2,538,367	-		Rru_A2185	0.41	-0.2
2,538,367	-		Rru_A2185	0.41	-1.0
2,538,367	-		Rru_A2185	0.41	-0.0
2,538,493	+		Rru_A2185	0.45	-0.3
2,538,494	-		Rru_A2185	0.45	-0.5
2,538,570	+		Rru_A2185	0.47	+1.0
2,538,570	+		Rru_A2185	0.47	+0.3
2,538,570	+		Rru_A2185	0.47	-1.0
2,538,571	-		Rru_A2185	0.47	-0.3
2,538,678	+		Rru_A2185	0.50	-0.5
2,538,679	-		Rru_A2185	0.50	-0.9
2,538,817	+		Rru_A2185	0.54	-0.4
2,538,817	+		Rru_A2185	0.54	-0.0
2,538,817	+		Rru_A2185	0.54	+0.4
2,538,817	+		Rru_A2185	0.54	+0.8
2,538,817	+		Rru_A2185	0.54	-0.5
2,538,818	-		Rru_A2185	0.54	-0.1
2,538,818	-		Rru_A2185	0.54	+0.6
2,538,818	-		Rru_A2185	0.54	+0.4
2,538,818	-		Rru_A2185	0.54	-0.1
2,538,818	-		Rru_A2185	0.54	-0.0
2,538,818	-		Rru_A2185	0.54	-0.6
2,538,818	-		Rru_A2185	0.54	-0.0
2,538,818	-		Rru_A2185	0.54	+0.7
2,538,818	-		Rru_A2185	0.54	-0.0
2,538,818	-		Rru_A2185	0.54	-0.0
2,538,819	+		Rru_A2185	0.54	-0.0
2,538,819	+		Rru_A2185	0.54	-1.0
2,538,820	-		Rru_A2185	0.54	-0.0
2,538,820	-		Rru_A2185	0.54	+0.5
2,538,820	-		Rru_A2185	0.54	+0.3
2,538,820	-		Rru_A2185	0.54	-0.0
2,538,820	-		Rru_A2185	0.54	-0.0
2,538,820	-		Rru_A2185	0.54	+0.1
2,538,879	+		Rru_A2185	0.56	-0.0
2,538,879	+		Rru_A2185	0.56	-0.3
2,538,879	+		Rru_A2185	0.56	+0.5
2,538,880	-		Rru_A2185	0.56	-0.0
2,539,011	+		Rru_A2185	0.60	-0.0
2,539,011	+		Rru_A2185	0.60	-1.4
2,539,011	+		Rru_A2185	0.60	-0.0
2,539,011	+		Rru_A2185	0.60	-0.0
2,539,011	+		Rru_A2185	0.60	-0.1
2,539,012	-		Rru_A2185	0.60	-0.1
2,539,012	-		Rru_A2185	0.60	-0.5
2,539,012	-		Rru_A2185	0.60	-0.2
2,539,012	-		Rru_A2185	0.60	-0.0
2,539,069	+		Rru_A2185	0.61	-0.0
2,539,069	+		Rru_A2185	0.61	-0.0
2,539,069	+		Rru_A2185	0.61	+0.5
2,539,089	+		Rru_A2185	0.62	-1.5
2,539,089	+		Rru_A2185	0.62	-0.0
2,539,089	+		Rru_A2185	0.62	+0.3
2,539,090	-		Rru_A2185	0.62	+0.2
2,539,090	-		Rru_A2185	0.62	-0.0
2,539,318	+		Rru_A2185	0.69	-3.6
2,539,319	-		Rru_A2185	0.69	+1.0
2,539,319	-		Rru_A2185	0.69	+1.7
2,539,319	-		Rru_A2185	0.69	-0.6
2,539,320	+		Rru_A2185	0.69	-1.3
2,539,320	+		Rru_A2185	0.69	-1.0
2,539,320	+		Rru_A2185	0.69	+0.4
2,539,321	-		Rru_A2185	0.69	-0.0
2,539,321	-		Rru_A2185	0.69	-0.4
2,539,321	-		Rru_A2185	0.69	-0.0
2,539,444	+		Rru_A2185	0.72	+1.2
2,539,444	+		Rru_A2185	0.72	-0.0
2,539,444	+		Rru_A2185	0.72	-1.6
2,539,444	+		Rru_A2185	0.72	-0.0
2,539,445	-		Rru_A2185	0.72	-0.0
2,539,445	-		Rru_A2185	0.72	-1.0
2,539,445	-		Rru_A2185	0.72	+0.1
2,539,445	-		Rru_A2185	0.72	-0.0
2,539,446	+		Rru_A2185	0.72	-0.6
2,539,447	-		Rru_A2185	0.72	-0.0
2,539,447	-		Rru_A2185	0.72	+0.4
2,539,447	-		Rru_A2185	0.72	-0.0
2,539,521	+		Rru_A2185	0.74	-0.8
2,539,521	+		Rru_A2185	0.74	+0.9
2,539,522	-		Rru_A2185	0.74	-0.0
2,539,522	-		Rru_A2185	0.74	+0.1
2,539,522	-		Rru_A2185	0.74	-0.7
2,539,899	+		Rru_A2185	0.85	-0.0
2,539,899	+		Rru_A2185	0.85	+0.5
2,540,245	+				-1.0
2,540,245	+				+0.7
2,540,246	-				-0.5
2,540,246	-				-0.0
2,540,320	+				+0.7
2,540,320	+				+0.2
2,540,321	-				-0.0
2,540,321	-				-0.3
2,540,321	-				-0.4
2,540,322	+				+0.3
2,540,322	+				-0.0
2,540,322	+				-0.0
2,540,322	+				-1.0
2,540,323	-				-0.5
2,540,323	-				+0.1
2,540,323	-				+0.1
2,540,346	+				+0.6
2,540,346	+				-0.1
2,540,346	+				-0.0
2,540,346	+				-0.0
2,540,347	-				-0.0
2,540,347	-				-0.0
2,540,350	+				-0.0
2,540,350	+				+0.6
2,540,546	+				-1.0
2,540,546	+				+0.8
2,540,547	-				+0.8
2,540,547	-				-1.0
2,540,551	+				-0.0
2,540,551	+				-1.0
2,540,715	+				-0.0
2,540,715	+				+0.2
2,540,715	+				-0.0
2,540,715	+				-0.0
2,540,716	-				+0.0
2,540,716	-				-0.0
2,540,716	-				-0.0
2,540,716	-				-0.0
2,540,970	+				+0.7
2,540,970	+				+0.8
2,540,970	+				+0.8
2,540,970	+				-1.0
2,540,970	+				+0.7
2,540,970	+				+0.2
2,540,970	+				+0.3
2,540,971	-				+0.6
2,540,971	-				-0.0
2,541,005	+				+0.0
2,541,006	-				-0.0
2,541,079	-				+0.3
2,541,079	-				+0.1
2,541,079	-				-0.0
2,541,174	-		Rru_A2186	0.38	-0.0
2,541,174	-		Rru_A2186	0.38	+0.2
2,541,265	-		Rru_A2186	0.71	+0.1
2,541,267	+		Rru_A2186	0.71	-0.2
2,541,267	+		Rru_A2186	0.71	+0.5
2,541,267	+		Rru_A2186	0.71	-0.1
2,541,267	+		Rru_A2186	0.71	-0.0
2,541,282	-		Rru_A2186	0.77	-1.2
2,541,339	+				+0.5