Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2183

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,533,916	+		Rru_A2181	0.76	-1.6
2,533,916	+		Rru_A2181	0.76	-0.0
2,534,081	+		Rru_A2181	0.88	-1.6
2,534,081	+		Rru_A2181	0.88	-0.0
2,534,081	+		Rru_A2181	0.88	+0.6
2,534,082	-		Rru_A2181	0.88	-1.4
2,534,082	-		Rru_A2181	0.88	-0.0
2,534,221	-				-1.0
2,534,223	-				-1.0
2,534,223	-				-1.0
2,534,223	-				-1.8
2,534,236	-				-2.6
2,534,236	-				-1.7
2,534,241	+				-0.0
2,534,241	+				-0.4
2,534,241	+				-2.6
2,534,242	-				-2.5
2,534,242	-				-3.1
2,534,242	-				-0.6
2,534,265	+				-0.0
2,534,490	+		Rru_A2182	0.54	-2.0
2,534,490	+		Rru_A2182	0.54	-0.0
2,534,490	+		Rru_A2182	0.54	-1.6
2,534,491	-		Rru_A2182	0.54	-0.0
2,534,491	-		Rru_A2182	0.54	-1.4
2,534,491	-		Rru_A2182	0.54	+0.8
2,534,688	+				-0.0
2,534,688	+				-2.4
2,534,688	+				-0.0
2,534,688	+				-2.8
2,534,689	-				-0.0
2,534,689	-				-1.2
2,535,382	-		Rru_A2183	0.60	-2.7
2,535,483	+		Rru_A2183	0.69	-0.0
2,535,483	+		Rru_A2183	0.69	-1.5
2,535,483	+		Rru_A2183	0.69	-2.8
2,535,484	-		Rru_A2183	0.69	-2.3
2,535,620	+		Rru_A2183	0.81	-0.0
2,535,621	-		Rru_A2183	0.81	-0.0
2,535,621	-		Rru_A2183	0.81	-1.8
2,535,621	-		Rru_A2183	0.81	-3.9
2,535,621	-		Rru_A2183	0.81	-1.9
2,535,621	-		Rru_A2183	0.81	-0.0
2,535,621	-		Rru_A2183	0.81	-1.9
2,535,621	-		Rru_A2183	0.81	-1.2
2,535,621	-		Rru_A2183	0.81	-1.9
2,535,872	+				-3.7
2,535,873	-				-1.5
2,536,028	-				-0.0
2,536,040	-				+2.0
2,536,423	+		Rru_A2184	0.55	+0.2
2,536,423	+		Rru_A2184	0.55	-0.1
2,536,651	-				+1.2
2,536,794	+				+0.7
2,536,808	+				+0.1