Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2181

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,531,989	-		Rru_A2180	0.14	-0.0
2,531,998	+		Rru_A2180	0.15	+0.3
2,531,999	-		Rru_A2180	0.15	-0.0
2,531,999	-		Rru_A2180	0.15	-0.0
2,531,999	-		Rru_A2180	0.15	-0.0
2,531,999	-		Rru_A2180	0.15	-1.0
2,531,999	-		Rru_A2180	0.15	-0.4
2,532,050	-		Rru_A2180	0.20	-0.0
2,532,050	-		Rru_A2180	0.20	+1.4
2,532,173	-		Rru_A2180	0.34	+0.3
2,532,385	+		Rru_A2180	0.58	+0.7
2,532,386	-		Rru_A2180	0.58	+0.9
2,532,410	-		Rru_A2180	0.60	+0.3
2,532,410	-		Rru_A2180	0.60	+0.5
2,532,493	+		Rru_A2180	0.70	-1.6
2,532,493	+		Rru_A2180	0.70	-0.0
2,532,493	+		Rru_A2180	0.70	+0.4
2,532,494	-		Rru_A2180	0.70	-1.0
2,532,595	+		Rru_A2180	0.81	-0.0
2,532,595	+		Rru_A2180	0.81	+1.1
2,532,710	+				+1.8
2,532,710	+				-0.0
2,532,711	-				-0.0
2,532,717	+				-0.5
2,532,717	+				-0.0
2,532,718	-				-0.3
2,532,718	-				+0.3
2,532,787	+				+1.0
2,532,833	-				-0.6
2,532,957	-				-2.5
2,533,028	+		Rru_A2181	0.12	-1.7
2,533,028	+		Rru_A2181	0.12	-2.3
2,533,028	+		Rru_A2181	0.12	-1.9
2,533,028	+		Rru_A2181	0.12	-2.2
2,533,029	-		Rru_A2181	0.12	-3.6
2,533,029	-		Rru_A2181	0.12	-3.0
2,533,029	-		Rru_A2181	0.12	-2.3
2,533,151	+		Rru_A2181	0.21	-2.5
2,533,185	+		Rru_A2181	0.24	-2.4
2,533,185	+		Rru_A2181	0.24	-2.4
2,533,185	+		Rru_A2181	0.24	-2.2
2,533,186	-		Rru_A2181	0.24	-2.7
2,533,186	-		Rru_A2181	0.24	-1.3
2,533,186	-		Rru_A2181	0.24	-1.9
2,533,186	-		Rru_A2181	0.24	-2.5
2,533,186	-		Rru_A2181	0.24	-1.9
2,533,186	-		Rru_A2181	0.24	-2.1
2,533,186	-		Rru_A2181	0.24	-1.2
2,533,186	-		Rru_A2181	0.24	-2.5
2,533,198	-		Rru_A2181	0.25	-3.4
2,533,223	+		Rru_A2181	0.26	-5.2
2,533,305	-		Rru_A2181	0.32	-1.0
2,533,411	+		Rru_A2181	0.40	-2.0
2,533,484	+		Rru_A2181	0.45	-0.0
2,533,484	+		Rru_A2181	0.45	-0.0
2,533,484	+		Rru_A2181	0.45	-0.0
2,533,484	+		Rru_A2181	0.45	-0.0
2,533,484	+		Rru_A2181	0.45	-1.0
2,533,485	-		Rru_A2181	0.45	-0.0
2,533,485	-		Rru_A2181	0.45	-0.0
2,533,583	+		Rru_A2181	0.52	-0.0
2,533,583	+		Rru_A2181	0.52	-0.0
2,533,583	+		Rru_A2181	0.52	-0.0
2,533,916	+		Rru_A2181	0.76	-1.6
2,533,916	+		Rru_A2181	0.76	-0.0
2,534,081	+		Rru_A2181	0.88	-1.6
2,534,081	+		Rru_A2181	0.88	-0.0
2,534,081	+		Rru_A2181	0.88	+0.6
2,534,082	-		Rru_A2181	0.88	-1.4
2,534,082	-		Rru_A2181	0.88	-0.0
2,534,221	-				-1.0
2,534,223	-				-1.0
2,534,223	-				-1.0
2,534,223	-				-1.8
2,534,236	-				-2.6
2,534,236	-				-1.7
2,534,241	+				-0.0
2,534,241	+				-0.4
2,534,241	+				-2.6
2,534,242	-				-2.5
2,534,242	-				-3.1
2,534,242	-				-0.6
2,534,265	+				-0.0
2,534,490	+		Rru_A2182	0.54	-2.0
2,534,490	+		Rru_A2182	0.54	-0.0
2,534,490	+		Rru_A2182	0.54	-1.6
2,534,491	-		Rru_A2182	0.54	-0.0
2,534,491	-		Rru_A2182	0.54	-1.4
2,534,491	-		Rru_A2182	0.54	+0.8
2,534,688	+				-0.0
2,534,688	+				-2.4
2,534,688	+				-0.0
2,534,688	+				-2.8
2,534,689	-				-0.0
2,534,689	-				-1.2