Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2179

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,530,275	+		Rru_A2178	0.74	+0.6
2,530,276	-		Rru_A2178	0.74	-0.1
2,530,276	-		Rru_A2178	0.74	+0.4
2,530,276	-		Rru_A2178	0.74	-0.0
2,530,276	-		Rru_A2178	0.74	+0.5
2,530,393	+		Rru_A2178	0.81	+0.5
2,530,393	+		Rru_A2178	0.81	+0.3
2,530,395	+		Rru_A2178	0.81	+0.2
2,530,395	+		Rru_A2178	0.81	+0.0
2,530,395	+		Rru_A2178	0.81	-0.0
2,530,395	+		Rru_A2178	0.81	+2.2
2,530,396	-		Rru_A2178	0.81	+0.2
2,530,465	+		Rru_A2178	0.85	+0.3
2,530,466	-		Rru_A2178	0.85	-0.0
2,530,501	-		Rru_A2178	0.87	-0.0
2,530,535	-		Rru_A2178	0.89	+0.2
2,530,536	+		Rru_A2178	0.89	+0.7
2,530,537	-		Rru_A2178	0.89	+0.7
2,530,537	-		Rru_A2178	0.89	+0.5
2,530,543	+		Rru_A2178	0.90	+0.6
2,530,834	-				-2.0
2,530,979	-				-1.2
2,531,019	-				-0.0
2,531,024	+				-0.0
2,531,141	+		Rru_A2179	0.12	-0.2
2,531,141	+		Rru_A2179	0.12	-0.0
2,531,142	-		Rru_A2179	0.12	+0.2
2,531,142	-		Rru_A2179	0.12	+0.1
2,531,147	+		Rru_A2179	0.12	-0.0
2,531,148	-		Rru_A2179	0.13	-0.3
2,531,148	-		Rru_A2179	0.13	+0.1
2,531,252	+		Rru_A2179	0.27	-0.0
2,531,252	+		Rru_A2179	0.27	-0.0
2,531,252	+		Rru_A2179	0.27	-1.0
2,531,252	+		Rru_A2179	0.27	+0.4
2,531,252	+		Rru_A2179	0.27	+0.2
2,531,252	+		Rru_A2179	0.27	+0.2
2,531,253	-		Rru_A2179	0.27	-1.0
2,531,253	-		Rru_A2179	0.27	-0.5
2,531,253	-		Rru_A2179	0.27	-0.3
2,531,253	-		Rru_A2179	0.27	-0.0
2,531,255	+		Rru_A2179	0.28	-1.9
2,531,255	+		Rru_A2179	0.28	+0.6
2,531,381	+		Rru_A2179	0.45	+0.5
2,531,382	-		Rru_A2179	0.45	+1.0
2,531,762	+				+1.1
2,531,763	-				-0.0
2,531,772	+				-0.0
2,531,772	+				-0.0
2,531,772	+				+1.9
2,531,773	-				-0.0
2,531,774	+				-0.1
2,531,775	-				-1.0
2,531,775	-				-1.0
2,531,775	-				-0.0
2,531,775	-				+0.4
2,531,779	+				+0.5
2,531,779	+				+0.4
2,531,779	+				-0.1
2,531,780	-				-1.0
2,531,780	-				+0.4
2,531,818	+				-0.0
2,531,989	-		Rru_A2180	0.14	-0.0
2,531,998	+		Rru_A2180	0.15	+0.3
2,531,999	-		Rru_A2180	0.15	-0.0
2,531,999	-		Rru_A2180	0.15	-0.0
2,531,999	-		Rru_A2180	0.15	-0.0
2,531,999	-		Rru_A2180	0.15	-1.0
2,531,999	-		Rru_A2180	0.15	-0.4
2,532,050	-		Rru_A2180	0.20	-0.0
2,532,050	-		Rru_A2180	0.20	+1.4
2,532,173	-		Rru_A2180	0.34	+0.3
2,532,385	+		Rru_A2180	0.58	+0.7
2,532,386	-		Rru_A2180	0.58	+0.9
2,532,410	-		Rru_A2180	0.60	+0.3
2,532,410	-		Rru_A2180	0.60	+0.5
2,532,493	+		Rru_A2180	0.70	-1.6
2,532,493	+		Rru_A2180	0.70	-0.0
2,532,493	+		Rru_A2180	0.70	+0.4
2,532,494	-		Rru_A2180	0.70	-1.0
2,532,595	+		Rru_A2180	0.81	-0.0
2,532,595	+		Rru_A2180	0.81	+1.1
2,532,710	+				+1.8
2,532,710	+				-0.0
2,532,711	-				-0.0
2,532,717	+				-0.5
2,532,717	+				-0.0
2,532,718	-				-0.3
2,532,718	-				+0.3