Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2141

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,483,880	+		Rru_A2139	0.62	+0.1
2,483,881	-		Rru_A2139	0.63	+0.8
2,483,881	-		Rru_A2139	0.63	-1.0
2,483,943	+		Rru_A2139	0.87	+0.1
2,483,943	+		Rru_A2139	0.87	+0.1
2,483,944	-		Rru_A2139	0.88	-1.0
2,484,006	-				+0.4
2,484,014	+				-1.3
2,484,174	+				-0.0
2,484,177	-				-0.1
2,484,177	-				+1.5
2,484,243	+				-0.3
2,484,243	+				+0.8
2,484,244	-				-0.0
2,484,288	+		Rru_A2140	0.17	-0.0
2,484,289	-		Rru_A2140	0.17	-0.0
2,484,291	+		Rru_A2140	0.18	-0.4
2,484,291	+		Rru_A2140	0.18	-0.0
2,484,291	+		Rru_A2140	0.18	+3.0
2,484,292	-		Rru_A2140	0.18	-0.2
2,484,375	+		Rru_A2140	0.32	-0.0
2,484,375	+		Rru_A2140	0.32	-0.0
2,484,376	-		Rru_A2140	0.32	+0.8
2,484,543	+		Rru_A2140	0.60	-0.0
2,484,703	-		Rru_A2140	0.87	+0.3
2,484,771	+				-0.8
2,484,771	+				-0.0
2,484,772	-				+0.1
2,484,772	-				+0.1
2,484,775	-				-1.0
2,484,775	-				+0.2
2,485,001	-		Rru_A2141	0.24	+1.4
2,485,032	+		Rru_A2141	0.27	+1.0
2,485,032	+		Rru_A2141	0.27	+1.1
2,485,377	+		Rru_A2141	0.63	-0.0
2,485,377	+		Rru_A2141	0.63	+0.5
2,485,378	-		Rru_A2141	0.63	+1.7
2,485,378	-		Rru_A2141	0.63	+1.0
2,485,378	-		Rru_A2141	0.63	-1.0
2,485,378	-		Rru_A2141	0.63	+1.0
2,485,726	+				+0.7
2,485,754	+				+2.4
2,485,754	+				+0.9
2,485,754	+				+2.6
2,485,754	+				+1.3
2,485,755	-				-1.4
2,485,755	-				-0.0
2,485,790	-				+1.1
2,486,175	-				+1.4
2,486,202	-				-1.0
2,486,202	-				+0.5
2,486,258	-				+0.5
2,486,334	+				-0.0
2,486,335	-				+0.6
2,486,594	+		Rru_A2142	0.26	-0.5
2,486,594	+		Rru_A2142	0.26	-0.0
2,486,595	-		Rru_A2142	0.26	+0.4
2,486,595	-		Rru_A2142	0.26	-0.0
2,486,595	-		Rru_A2142	0.26	+0.3