Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2117
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
2,458,428 | - | -0.0 | |||
2,458,622 | + | -0.0 | |||
2,458,624 | + | -0.0 | |||
2,458,624 | + | -0.0 | |||
2,458,638 | + | -0.0 | |||
2,458,638 | + | +0.4 | |||
2,458,770 | - | Rru_A2118 | 0.18 | -0.0 | |
2,458,774 | - | Rru_A2118 | 0.18 | -0.1 | |
2,458,774 | - | Rru_A2118 | 0.18 | -0.0 | |
2,458,986 | + | Rru_A2118 | 0.44 | +0.1 | |
2,458,986 | + | Rru_A2118 | 0.44 | -0.0 | |
2,458,986 | + | Rru_A2118 | 0.44 | -0.2 | |
2,458,986 | + | Rru_A2118 | 0.44 | +0.6 | |
2,458,987 | - | Rru_A2118 | 0.44 | +0.1 | |
2,458,987 | - | Rru_A2118 | 0.44 | +1.0 | |
2,458,987 | - | Rru_A2118 | 0.44 | +0.0 | |
2,458,987 | - | Rru_A2118 | 0.44 | -0.5 | |
2,458,989 | + | Rru_A2118 | 0.44 | -0.0 | |
2,459,083 | - | Rru_A2118 | 0.56 | -0.0 | |
2,459,268 | - | Rru_A2118 | 0.78 | -0.0 | |
2,459,268 | - | Rru_A2118 | 0.78 | -1.2 | |
2,459,268 | - | Rru_A2118 | 0.78 | -0.0 |
Or see this region's nucleotide sequence