Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2101

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,434,768	-				-0.0
2,435,016	+		Rru_A2100	0.33	-0.0
2,435,017	-		Rru_A2100	0.33	-0.0
2,435,118	+		Rru_A2100	0.44	-0.0
2,435,283	+		Rru_A2100	0.62	-0.0
2,435,283	+		Rru_A2100	0.62	-0.0
2,435,283	+		Rru_A2100	0.62	-0.0
2,435,284	-		Rru_A2100	0.62	-0.0
2,435,284	-		Rru_A2100	0.62	-0.0
2,435,284	-		Rru_A2100	0.62	-0.0
2,435,284	-		Rru_A2100	0.62	-0.0
2,435,284	-		Rru_A2100	0.62	-1.0
2,435,284	-		Rru_A2100	0.62	-0.0
2,435,284	-		Rru_A2100	0.62	-0.0
2,435,499	+		Rru_A2100	0.85	-1.0
2,435,499	+		Rru_A2100	0.85	-0.0
2,435,500	-		Rru_A2100	0.85	-0.0
2,435,500	-		Rru_A2100	0.85	-1.0
2,435,500	-		Rru_A2100	0.85	-0.0
2,435,500	-		Rru_A2100	0.85	-0.0
2,435,556	-				-0.0
2,435,626	-				+1.0
2,435,635	+				-2.0
2,435,635	+				-1.0
2,435,636	-				-0.0
2,435,636	-				+1.4
2,435,693	+				-0.3
2,435,777	+				-0.7
2,435,777	+				-0.0
2,435,797	+				-0.0
2,435,798	-				+1.1
2,435,798	-				-0.0
2,436,062	+		Rru_A2101	0.22	+0.0
2,436,063	-		Rru_A2101	0.22	-0.0
2,436,110	-		Rru_A2101	0.26	-0.3
2,436,256	+		Rru_A2101	0.36	+0.2
2,436,256	+		Rru_A2101	0.36	-0.0
2,436,256	+		Rru_A2101	0.36	-0.0
2,436,256	+		Rru_A2101	0.36	-0.3
2,436,256	+		Rru_A2101	0.36	-0.0
2,436,257	-		Rru_A2101	0.36	+0.8
2,436,257	-		Rru_A2101	0.36	+0.1
2,436,257	-		Rru_A2101	0.36	+0.4
2,436,257	-		Rru_A2101	0.36	-0.0
2,436,266	-		Rru_A2101	0.36	-0.0
2,436,268	+		Rru_A2101	0.37	+0.4
2,436,268	+		Rru_A2101	0.37	-0.1
2,436,268	+		Rru_A2101	0.37	-0.0
2,436,268	+		Rru_A2101	0.37	+0.1
2,436,380	-		Rru_A2101	0.44	-0.0
2,436,614	+		Rru_A2101	0.61	-0.0
2,436,614	+		Rru_A2101	0.61	-0.0
2,436,615	-		Rru_A2101	0.61	+0.1
2,436,615	-		Rru_A2101	0.61	+0.4
2,436,710	+		Rru_A2101	0.67	+1.5
2,436,710	+		Rru_A2101	0.67	-0.3
2,436,711	-		Rru_A2101	0.67	-0.5
2,436,711	-		Rru_A2101	0.67	-0.0
2,436,711	-		Rru_A2101	0.67	-0.0
2,437,002	-		Rru_A2101	0.88	-1.2
2,437,002	-		Rru_A2101	0.88	-0.5
2,437,120	+				+0.5
2,437,120	+				-0.0
2,437,120	+				+0.2
2,437,120	+				-0.0
2,437,120	+				+0.3
2,437,120	+				-2.5
2,437,121	-				+0.1
2,437,121	-				+0.2
2,437,169	+				+0.3
2,437,217	+				+0.6
2,437,240	-				-2.0
2,437,240	-				+0.6
2,437,262	+				+0.4
2,437,290	+				+0.9
2,437,290	+				+1.8
2,437,291	-				-0.0
2,437,319	+				-0.0
2,437,319	+				+0.8
2,437,677	+				-0.0
2,437,678	-				+0.3
2,437,678	-				-0.0
2,437,678	-				-0.0
2,437,767	-				-0.0
2,437,806	+				+0.9
2,437,900	+				+0.8
2,437,918	+		Rru_A2103	0.10	-0.0
2,437,995	-		Rru_A2103	0.17	-0.0