Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2089

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
2,416,666	-				-0.0
2,416,666	-				+0.1
2,416,795	+				-0.0
2,416,795	+				-0.0
2,416,796	-				-0.0
2,416,796	-				-0.0
2,416,796	-				-0.0
2,416,797	+				-0.0
2,416,797	+				-0.0
2,416,849	+				-0.3
2,416,849	+				-0.0
2,416,850	-				-1.3
2,416,990	+		Rru_A2088	0.27	+1.1
2,416,991	-		Rru_A2088	0.28	+0.7
2,417,041	+		Rru_A2088	0.34	-0.7
2,417,042	-		Rru_A2088	0.35	-0.7
2,417,042	-		Rru_A2088	0.35	-0.0
2,417,113	+		Rru_A2088	0.44	-0.3
2,417,113	+		Rru_A2088	0.44	-0.0
2,417,113	+		Rru_A2088	0.44	+0.1
2,417,113	+		Rru_A2088	0.44	-0.2
2,417,113	+		Rru_A2088	0.44	-1.9
2,417,114	-		Rru_A2088	0.44	-0.0
2,417,114	-		Rru_A2088	0.44	-1.0
2,417,114	-		Rru_A2088	0.44	-0.0
2,417,114	-		Rru_A2088	0.44	-0.0
2,417,114	-		Rru_A2088	0.44	-0.7
2,417,115	+		Rru_A2088	0.45	-0.0
2,417,115	+		Rru_A2088	0.45	+0.6
2,417,116	-		Rru_A2088	0.45	+0.7
2,417,245	+		Rru_A2088	0.62	-0.9
2,417,245	+		Rru_A2088	0.62	-0.3
2,417,245	+		Rru_A2088	0.62	-0.0
2,417,253	+		Rru_A2088	0.63	+0.2
2,417,254	-		Rru_A2088	0.64	-0.0
2,417,254	-		Rru_A2088	0.64	+0.6
2,417,254	-		Rru_A2088	0.64	+1.1
2,417,434	+		Rru_A2088	0.88	-1.6
2,417,434	+		Rru_A2088	0.88	-0.0
2,417,434	+		Rru_A2088	0.88	-0.8
2,417,435	-		Rru_A2088	0.88	-0.6
2,417,435	-		Rru_A2088	0.88	+0.2
2,417,519	-				-0.0
2,417,578	-				-0.0
2,417,587	-				+2.8
2,417,712	+		Rru_A2089	0.26	-0.0
2,417,712	+		Rru_A2089	0.26	-0.0
2,417,712	+		Rru_A2089	0.26	-1.0
2,417,712	+		Rru_A2089	0.26	+0.2
2,417,713	-		Rru_A2089	0.26	-0.0
2,417,713	-		Rru_A2089	0.26	-0.0
2,417,714	+		Rru_A2089	0.26	-0.9
2,417,715	-		Rru_A2089	0.26	-0.0
2,417,764	-		Rru_A2089	0.33	-0.0
2,417,871	+		Rru_A2089	0.49	-0.3
2,417,952	+		Rru_A2089	0.61	-0.0
2,418,034	+		Rru_A2089	0.72	-0.1
2,418,034	+		Rru_A2089	0.72	-0.7
2,418,057	+		Rru_A2089	0.76	-0.0
2,418,057	+		Rru_A2089	0.76	-0.3
2,418,057	+		Rru_A2089	0.76	-0.0
2,418,057	+		Rru_A2089	0.76	-0.0
2,418,057	+		Rru_A2089	0.76	-0.0
2,418,057	+		Rru_A2089	0.76	-1.0
2,418,058	-		Rru_A2089	0.76	+0.1
2,418,058	-		Rru_A2089	0.76	+0.2
2,418,058	-		Rru_A2089	0.76	-0.0
2,418,058	-		Rru_A2089	0.76	+0.2
2,418,058	-		Rru_A2089	0.76	-1.0
2,418,058	-		Rru_A2089	0.76	-0.0
2,418,058	-		Rru_A2089	0.76	-0.1
2,418,058	-		Rru_A2089	0.76	-0.3
2,418,058	-		Rru_A2089	0.76	-0.0
2,418,132	+		Rru_A2089	0.87	-2.6
2,418,212	+				-0.3
2,418,213	-				+0.1
2,418,262	+				-1.9
2,418,263	-				+0.8
2,418,270	-				+0.8
2,418,409	+		Rru_A2090	0.25	-0.0
2,418,965	+				+1.1